FMO07046.5prime Sequence
824 bp (824 high quality bases) assembled on 2008-10-03
> FMO07046.5prime
CAGTCGACATGGCCTATGACTTGAAGAAGGAGTCAGACGTGAAGGAGTAC
GTAGAAAAGCTGGGCGTGGAATATCGATTCGGGTGCTATTCCGAGAAGAA
GCCGGAAGCGTGCCACTTGCTGGGCGACTACTTGGAGGGCATCAAGAAAG
ACTTTGAAAAGGCCTCCAAGGTGTACAAGTCGACTTGCGACGACTATGGT
TACGCAAAGTCCTGCTACAAATACGGCAACTACAGTTTCCTTGGAAAAGG
CAAGAGCGGTAGCAAGGGGAATCCACAAGTGGCCTACGAGTACTACGAGA
AGGGCTGTAACTTAAACGACTCGGACGCCTGTCTTCACTCCGGCCTGCTG
CTCGTTTCAAAGTCCATGCCTAGGGAGATCGACTGGAATGTGCCCAAGGG
CCTGGAGTTTCTGACCAAAAGCTGCGACTTGAACAACGCCACTGCCTGCT
TTTATCTCTCCGGGATGCACATCTCGGGCGTGCAAAAGAAGGCGGATCAG
AGTGCTGTCACTGCATCCTCCGGAAGTGGTACATCATCACCCCCCGCCGG
ACAACCGCCTTTAAAGGACTCCGACTATATTGTTCTAAAAGACATGAAGA
AGGCTTTCCAGTTTGCCCACAAGGCTTGCGAGCTTCGCAATATGTATGCG
TGTGCCAATCTTAGCCAGATGTACGCCCGGGGCGATGGGATCGAGAAGAA
CGAAAAGGAAGCGGAGAAGTACAAGAAGCTGGCCCTAGAAATGCAGGACG
AGGTGAAGAAGCAGCATGATACGTTAGGGTTCCAGCAGGGCGTGGGCATG
CCTAATGCAAGCTTTCTAGACCAT
FMO07046.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13865-RC | 2611 | CG13865-RC | 87..885 | 8..806 | 3995 | 100 | Plus |
| CG13865-RA | 1194 | CG13865-RA | 87..885 | 8..806 | 3995 | 100 | Plus |
| CG13865-RB | 635 | CG13865-RB | 87..478 | 8..399 | 1960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 23014451..23014860 | 397..806 | 2050 | 100 | Plus |
| X | 23542271 | X | 23013817..23014109 | 107..399 | 1465 | 100 | Plus |
| X | 23542271 | X | 23013581..23013681 | 8..108 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:39 has no hits.
FMO07046.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:30 Download gff for
FMO07046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13865-RA | 82..896 | 1..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:43 Download gff for
FMO07046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13865-RA | 66..880 | 1..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:37 Download gff for
FMO07046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13865-RA | 82..896 | 1..814 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:37 Download gff for
FMO07046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 23013576..23013681 | 1..108 | 96 | -> | Plus |
| X | 23013819..23014108 | 109..398 | 100 | -> | Plus |
| X | 23014453..23014871 | 399..814 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:30 Download gff for
FMO07046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 22415412..22415517 | 1..108 | 96 | -> | Plus |
| arm_X | 22415655..22415944 | 109..398 | 100 | -> | Plus |
| arm_X | 22416289..22416707 | 399..814 | 99 | | Plus |
