FMO07049.5prime Sequence
503 bp (503 high quality bases) assembled on 2008-10-03
> FMO07049.5prime
CAGTCGACATGTTCCGTTTGTTGGTTCTTGCGGCCTGCCTGGCCATCAGT
GTCCACGCCTACTCCGATGGTGCTCCAAAGGCCGCCTGTCGTGACCTGAC
GCCCCAGCACGGAGCCAAGCTGCAGGTGACCAAGCCGCCGTACAGCATCT
CCGGACCCTCCCATGTGCGCTCGGATCAAAAGCTGACCCTGACGCTGGGC
GGCGATGAGTTCCTTGGCTTCATGATCCAGGCACGCGATGGCCAGAACCG
CGTCGTCGGCCAGTTCCAGGTGGTGGACTCCGTGCACTCGCAGACCTTGG
ACTGCTCCGGCAAGGACGACACCATCACCCATCTGAGTGCGCAAAAGGGC
AAGCCGCTGACCGGCATCACCTTCGACTGGATTCCGCCAGCAGGCTACAA
GGGCAACGTCAAGTTCATGGCCACCGTGGTGCAAACCGGATTCGTTTACT
GGGTGGGTCGCGTCACAAAAGACATCGATGTGGAGGCAAGCTTTCTAGAC
CAT
FMO07049.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)34Fc-RA | 656 | CG7532-RA | 54..535 | 4..485 | 2380 | 99.6 | Plus |
| l(2)34Fc-RB | 733 | CG7532-RB | 42..518 | 9..485 | 2370 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14349235..14349645 | 485..75 | 2040 | 99.8 | Minus |
| 2L | 23513712 | 2L | 14349708..14349780 | 81..9 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:30:00 has no hits.
FMO07049.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:28 Download gff for
FMO07049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)34Fc-RA | 50..543 | 1..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:34:16 Download gff for
FMO07049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7532-RA | 47..540 | 1..493 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:32 Download gff for
FMO07049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)34Fc-RA | 50..543 | 1..493 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:32 Download gff for
FMO07049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14349227..14349639 | 81..493 | 98 | <- | Minus |
| 2L | 14349709..14349785 | 1..80 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:28 Download gff for
FMO07049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14349227..14349639 | 81..493 | 98 | <- | Minus |
| arm_2L | 14349709..14349785 | 1..80 | 95 | | Minus |
