FMO07051.5prime Sequence
707 bp (707 high quality bases) assembled on 2008-10-03
> FMO07051.5prime
CAGTCGACATGGCCCTCTCGATCTTCAAAGACTTGCCGGCGGAGCATCCT
CGCCACTTGATTCCCTCGCTATGCAGGCAATTCTATCATTTGGGATGGGT
GACCGGCACAGGAGGTGGCATGAGCATTAAGTACAACGATGAGATCTACA
TAGCACCGTCGGGCGTCCAGAAGGAGCGAATGCAGCCGGAGGATCTCTTC
GTGCAGGATATAACCGGCAAGGATCTGCAACTGCCGCCTGAGATCAAGGG
CCTGAAGAAGAGCCAATGTACGCCGCTCTTTATGCTGGCCTATCAGCATC
GGCAGGCGGGAGCCGTCATCCACACCCATTCGCAGCACGCCGTAATGGCC
ACGCTCCTGTGGCCAGGGAAAACCTTCCGCTGCACCCACTTGGAGATGAT
CAAGGGCGTCTACGATGAGGCGGACAAGCGATATTTGCGCTACGACGAGG
AGCTCGTCGTACCGATCATCGAGAACACACCCTTTGAACGCGACCTGGCC
GACAGTATGTACGCCGCCATGATGGAGTATCCGGGCTGCAGTGCGATCCT
GGTTCGACGACACGGCGTCTACGTTTGGGGACAGAACTGGGAGAAGGCCA
AAACCATGTCGGAATGCTATGACTATCTCTTCTCCATTGCCGTGGAAATG
AAGAAGGCCGGAATCGATCCGGAAAAGTTCGAGAGCTCAGCAAGCTTTCT
AGACCAT
FMO07051.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11134-RB | 913 | CG11134-RB | 119..803 | 5..689 | 3410 | 99.9 | Plus |
| CG11134-RA | 901 | CG11134-RA | 107..791 | 5..689 | 3410 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13738440..13738912 | 137..609 | 2365 | 100 | Plus |
| X | 23542271 | X | 13738245..13738376 | 5..136 | 645 | 99.2 | Plus |
| X | 23542271 | X | 13738980..13739067 | 602..689 | 425 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:10:35 has no hits.
FMO07051.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:28 Download gff for
FMO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11134-RA | 104..795 | 1..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:34:17 Download gff for
FMO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11134-RA | 100..791 | 1..694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:57 Download gff for
FMO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11134-RA | 104..795 | 1..694 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:57 Download gff for
FMO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13738242..13738376 | 1..136 | 98 | -> | Plus |
| X | 13738440..13738910 | 137..607 | 100 | -> | Plus |
| X | 13738986..13739071 | 608..694 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:28 Download gff for
FMO07051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13632275..13632409 | 1..136 | 98 | -> | Plus |
| arm_X | 13632473..13632943 | 137..607 | 100 | -> | Plus |
| arm_X | 13633019..13633104 | 608..694 | 97 | | Plus |
