FMO07055.5prime Sequence
782 bp (782 high quality bases) assembled on 2008-10-03
> FMO07055.5prime
CAGTCGACATGGGAGTAACTATCCTTCAACCGTATCCCTTACCCGAAGGC
AAATCGGGTGCCCACATAATCGATCAGCTGAGCAAGCGTCTGCTCGCCCT
GGGCGCCACACATGCCGGTCAATTTCTGGTGGACTGCGAAACGTTCATCT
CGACGCCACAGCCGCACAATGGAGCACCTGGACGCGCAGTCCACGTCCTG
CACAACTCCGAGTATCCCGCCTCCACGTTCTCGATCATCGACAATGGCAC
CGGCAAACAAGTGGCCATTGTCGCCGACAATATCTTCGATCTGCTCATGC
TCAAGATGACCAACACCTTCACCTCCAAAAAGCAGACCAAAATCGAGTCC
CGTGGCGCTCGTTTCGAGTATGGTGACTTTGTTATCAAACTCGGTTCCGT
CACCATGATGGAGCACTTCAAGGGCATCCTCATCGAAATCGAGTACAAGT
CATGCGTGATTCTGGCCTACTGCTGGGAAATGATACGCGAAATGCTGCAG
GGATTCCTCGGCATTGCTGTGAATAAGGACTTTCCCTCCTATTTCGCTCC
ACAGACAATAATGACGGCAATGGGGCAACAGCAGCTGCATGCCAAGCACA
ACGACATCTTTGAGCCAATGGACACCGTGAAACAATACCTGGAGCAGTTC
ACCAACTATAGGAAGCATGTGACTCTTATGGGCGGTATGGGCAGTGGACC
GGGTAGCCAACAGGTTGGTCCGAACGTGCATATGTCGCCGGCGGTGGCGG
GACTACATCGATCCGCAAGCTTTCTAGACCAT
FMO07055.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED20-RB | 1037 | CG18780-RB | 88..843 | 9..764 | 3780 | 100 | Plus |
| MED20-RA | 1037 | CG18780-RA | 88..843 | 9..764 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8072006..8072761 | 764..9 | 3780 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:40:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| R1-2 | 3216 | R1-2 R1-2 3216bp | 1623..1656 | 125..158 | 107 | 79.4 | Plus |
FMO07055.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:37 Download gff for
FMO07055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED20-RA | 80..843 | 1..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:34:20 Download gff for
FMO07055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED20-RA | 76..839 | 1..764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:58 Download gff for
FMO07055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED20-RA | 80..843 | 1..764 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:58 Download gff for
FMO07055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8072006..8072769 | 1..764 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:37 Download gff for
FMO07055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8072006..8072769 | 1..764 | 99 | | Minus |
