FMO07057.5prime Sequence
614 bp (614 high quality bases) assembled on 2008-10-03
> FMO07057.5prime
CAGTCGACATGTCGCTGCTGGGCGCCTTTGCCAGATTGAGTCTGCAGAGA
AGTGGCGGCGTCGCCGGTGCCGCCTTTGCACGTTGCCTCCACACGACACC
AGTTCTTTGTGCGGAGCCCCTGAAGAAAAAGAAGAAACTGGATCCGCAGA
TTGTCAAGCAGCGCGAGGATCGCAAGAAGAAGAAGATCGAAAAGCAGATT
CGCCGGCTGGAGAAGAATGCCCGTCAGCTGAAGCCCGTGGATGAACTGGA
GGTTCCACTGGAGCTCATCGACGAAAAGGACAAACGGCAGCGGAAGCTAG
CTCCACTGACCATCGACCAGTTGGAGGAACGTGCTCTCCTCAAGAAGCAG
TGGGCGCACTACAAGCACGACGAGCGCGTAGCAGACTTTCAGATCATCGA
CCGGCTGGTCCAGGCGCAAAACAAGGCGCTGGCGGAACTTCGGCGCGAGT
CCGAGGAGCTCTACCAGGCGGCCATCGATATCGATCCCCAGCTGCTGCCC
GTCGCCGTCAAAGGACCCGTTGCCACGCCCCCCATTAAGGATTACGTCAG
TCCCGATGGCGACTACCTGCACCAATCCATGAAGTGGGAGGTCAAAGCAA
GCTTTCTAGACCAT
FMO07057.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL40-RA | 716 | CG5242-RA | 74..661 | 9..596 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11408386..11408701 | 281..596 | 1580 | 100 | Plus |
| 3R | 32079331 | 3R | 11408078..11408326 | 32..280 | 1245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:57:49 has no hits.
FMO07057.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:20:40 Download gff for
FMO07057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL40-RA | 74..667 | 9..602 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:34:21 Download gff for
FMO07057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL40-RA | 69..662 | 9..602 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:28 Download gff for
FMO07057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL40-RA | 74..667 | 9..602 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:28 Download gff for
FMO07057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11407991..11408016 | 9..34 | 100 | -> | Plus |
| 3R | 11408081..11408326 | 35..280 | 100 | -> | Plus |
| 3R | 11408386..11408707 | 281..602 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:20:40 Download gff for
FMO07057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7233713..7233738 | 9..34 | 100 | -> | Plus |
| arm_3R | 7233803..7234048 | 35..280 | 100 | -> | Plus |
| arm_3R | 7234108..7234429 | 281..602 | 99 | | Plus |
