FMO07060.5prime Sequence
428 bp (428 high quality bases) assembled on 2008-10-03
> FMO07060.5prime
CAGTCGACATGTCGAGCGAGGAAACAAAGACTTTCACGCGGGCCGAGGTC
GCCAAGCACAACACGAACAAGGACACCTGGCTGCTCATACACAACAACAT
CTACGACGTCACCGCCTTCCTCAACGAGCATCCCGGTGGCGAAGAGGTGC
TCATCGAGCAGGCCGGCAAAGATGCCACGGAGAACTTTGAGGACGTTGGC
CACAGCAACGATGCCCGCGACATGATGAAGAAGTACAAAATCGGTGAGCT
GGTGGAGAGCGAAAGGACAAGCGTGGCCCAGAAGTCGGAGCCGACCTGGA
GCACGGAACAGCAAACCGAGGAGAGTTCTGTGAAGTCGTGGCTGGTGCCC
CTCGTCCTGTGCTTGGTGGCCACGCTCTTCTACAAGTTCTTCTTTGGCGG
TGCCAAGCAAGCAAGCTTTCTAGACCAT
FMO07060.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyt-b5-RB | 830 | CG2140-RB | 105..507 | 8..410 | 2015 | 100 | Plus |
| Cyt-b5-RA | 692 | CG2140-RA | 88..369 | 129..410 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7535330..7535613 | 127..410 | 1420 | 100 | Plus |
| 2R | 25286936 | 2R | 7533610..7533730 | 8..128 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:55 has no hits.
FMO07060.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:27 Download gff for
FMO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-b5-RB | 99..507 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:34:14 Download gff for
FMO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-b5-RB | 97..505 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:27 Download gff for
FMO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyt-b5-RB | 99..507 | 1..410 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:27 Download gff for
FMO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7533604..7533730 | 1..128 | 96 | -> | Plus |
| 2R | 7535332..7535613 | 129..410 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:27 Download gff for
FMO07060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3421109..3421235 | 1..128 | 96 | -> | Plus |
| arm_2R | 3422837..3423118 | 129..410 | 100 | | Plus |
