Clone FMO07066 Report

Search the DGRC for FMO07066

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:70
Well:66
Vector:pMK33-CFH-BD
Associated Gene/TranscriptBka-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07066.5prime Sequence

626 bp (626 high quality bases) assembled on 2008-10-03

> FMO07066.5prime
CAGTCGACATGGGAAAACACAAGAAAACGCAGAAGGTTAAGAAACAACGT
AATGCACAGCTTAAACGCATCATAAAACCCACAGACGCGCGGCTTAAGGA
TCAGATTCGAGTGAAAAGAAAGAAGGCCGAGGATCCGCACCAGATCAAGG
TGCACGAGGCCACCCAGCAGAGCTCCGCTCTGTTCTTCCAGTACAACACC
CAGCTGGGACCGCCGTACCACATCGTTCTGGACACGAACTTCATTAACTT
TAGCATTAAGAACAAACTGGATATTGTGCAAGGTATGATGGACTGTCTGT
ATGCCAAGTGCATACCCTATATCTCCGACTGCGTGCGTGCCGAGCTGGAG
AAGCTGGGCAACAAGTACAAGCTGGCCCTGCGCATCATCTCCGATCCCAG
ATTCGAGCGACTGCCGTGCCTGCACAAGGGCACCTATGCGGACGATTGCC
TCGTGGAGCGGGTGCGCCAGCACAAATGCTACATTGTGGCCACCAACGAC
AAGGACCTTAAGAATCGCATCCGGAAGATTCCCGGCGTGCCCATCATGTA
CGTGGCTGCGCATAAGTACGCGATTGAGCGTATGCCAGAAGCGTATGGAG
TCAAGGCGGCAAGCTTTCTAGACCAT

FMO07066.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:01
Subject Length Description Subject Range Query Range Score Percent Strand
Bka-RA 758 CG4539-RA 92..691 9..608 3000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9895440..9896037 11..608 2990 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:33:00 has no hits.

FMO07066.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:19 Download gff for FMO07066.5prime
Subject Subject Range Query Range Percent Splice Strand
Bka-RA 83..700 1..617 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:34:43 Download gff for FMO07066.5prime
Subject Subject Range Query Range Percent Splice Strand
Bka-RA 81..698 1..617 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:05 Download gff for FMO07066.5prime
Subject Subject Range Query Range Percent Splice Strand
Bka-RA 83..700 1..617 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:05 Download gff for FMO07066.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9895432..9896046 1..617 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:19 Download gff for FMO07066.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9895432..9896046 1..617 98   Plus