FMO07067.5prime Sequence
1130 bp (1026 high quality bases) assembled on 2008-10-03
> FMO07067.5prime
CAGTCGACATGGAGTTGTCATTGTTCACATTAAATTTGTTCGATGTGGTC
TCGGTGGTGCTCACATTTCTTGTGATATTTCTAGTGCAAATTCTTAACGT
TTACTTGCATATACTCGACGATAATGCCGATAATGGCAAATCGATCGATG
TGGTGGACAAGGCACCAGCGAAAGAATGCCCGTTACTTGAGTCCCAGTCA
CCCAGTTCACCAATCGCCACCACTCTACCGAAATCCCAGGCATCGAGCAA
CGGCAAGTTGGAGAAGCAAATAAGTCTGCTGGACAGCGATAGCCACGAGG
ATGAGGACACATTGTCCTTGGAAAATCTGTTTCCCTGCGATCAAACCGAG
ATCTATGCCTCCAAGAAGATCAGCTTCATAATCGACGAGCTCATCCAGAC
GGAGGTGAACTATGTGAACAATCTGAAGAAGGGTATGCTAAACTATGGAC
AGCTGAAGGATGTCGAGGATTTGCCAGAAGCCCTGAGTGGCGAAACGAAA
CAAAAGATGCTGCTGGGAAACATTAAGGAAATACTGGAGCTGCATGAGAA
GGAGATACTGCCGCTCATGTTGCGCAATCAGCGGGATCTCAAAGGTCTAT
TCGATGAGTTTGCTGCTCACTTCGAGAAAAATAGCTTCTATTGCTATGTG
AGCTTCACTATGGGGAAGAAGTCTTCTATGCAACTGCGACAGGATAATCG
GCTGTGGTTGCAGACATATCAAACCCAAATAAAAGACAAGCTGGGCATCG
ACAGCTTCCTAGTTCAGCCCATCCAAAGACTGACCAGATATCCATCGCTC
CTGCAGCAGTTCATATCGGAATTCTACAAAAGTGGAATTAGTTGCAAGCC
AGTGCTGACTGCAGTTTGCAACTCGAGACGCGCATGCGACGCGCTCTGGA
TGTGTCAATCAGGCCGAGGAGATACCCAACATCGAGGAGCTCCGAGTTGG
ACGTCCTGCAGCTGGGAAACTTCCGCCGTGCGACGGATTCGACGCCCAGC
ACCTTTCCCACCCGAAAGTACCGCTCCAGGTGTTCCTGTTCGATCGCTTG
TTGGTGTGCCGAGTGCAAGAGCGGCTGGCCTACCGCAGACACTACAACTG
GGAGACCGTGGACTTGCAGCCACTGGACTC
FMO07067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15611-RB | 1627 | CG15611-RB | 150..1288 | 9..1130 | 5135 | 97.5 | Plus |
| CG15611-RA | 1759 | CG15611-RA | 566..1420 | 293..1130 | 3715 | 96.7 | Plus |
| CG15611-RA | 1759 | CG15611-RA | 150..434 | 9..293 | 1425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17110165..17110500 | 291..626 | 1680 | 100 | Plus |
| 2R | 25286936 | 2R | 17108993..17109276 | 9..292 | 1420 | 100 | Plus |
| 2R | 25286936 | 2R | 17113628..17113754 | 818..942 | 535 | 98.4 | Plus |
| 2R | 25286936 | 2R | 17113466..17113573 | 712..819 | 525 | 99.1 | Plus |
| 2R | 25286936 | 2R | 17113316..17113404 | 625..713 | 445 | 100 | Plus |
| 2R | 25286936 | 2R | 17113823..17113941 | 945..1059 | 340 | 93.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:12 has no hits.
FMO07067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:42 Download gff for
FMO07067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15611-RB | 142..1288 | 1..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:34:57 Download gff for
FMO07067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15611-RB | 139..1285 | 1..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:59 Download gff for
FMO07067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15611-RB | 142..1288 | 1..1130 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:59 Download gff for
FMO07067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17108985..17109276 | 1..292 | 98 | -> | Plus |
| 2R | 17110167..17110500 | 293..626 | 100 | -> | Plus |
| 2R | 17113318..17113404 | 627..713 | 100 | -> | Plus |
| 2R | 17113468..17113572 | 714..818 | 99 | -> | Plus |
| 2R | 17113629..17113760 | 819..946 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:42 Download gff for
FMO07067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12996490..12996781 | 1..292 | 98 | -> | Plus |
| arm_2R | 12997672..12998005 | 293..626 | 100 | -> | Plus |
| arm_2R | 13000823..13000909 | 627..713 | 100 | -> | Plus |
| arm_2R | 13000973..13001077 | 714..818 | 99 | -> | Plus |
| arm_2R | 13001134..13001265 | 819..946 | 96 | -> | Plus |
