FMO07072.5prime Sequence
722 bp (722 high quality bases) assembled on 2008-10-03
> FMO07072.5prime
CAGTCGACATGTCTTCAACCCCAGCAGCGGGCAGTGCCGCCGAGGTGGCC
ACCTCCAGTGCCACCTCAAATGCGCCCAGTGCACCCAGCACAACGGCCAG
CAACGTGAGCAATACCAGCCAGCCGACGACTGCCGGAACTCCGCAGGCAC
GTGGCGGCAGGGGCAGCAACGCCAACGGTGGTGCCTCCGGGAGCAATGCC
GGTGGCGGAGATGAGCCGCGAAAGGAAGCCAAAACAACGCCCAGGATATC
CAGGGCGCTGGGCACCTCGGCCAAGCGCATACAGAAGGAGCTGGCTGAGA
TCACACTGGATCCACCGCCCAACTGCAGTGCCGGGCCCAAGGGCGACAAC
CTGTACGAGTGGGTATCCACCATACTGGGACCACCCGGATCCGTCTACGA
GGGCGGCGTCTTCTTCCTCGACATACACTTCTCGCCGGAGTATCCCTTCA
AGCCACCCAAAGTCACGTTCCGCACGCGCATCTATCACTGCAACATCAAC
AGCCAGGGCGTCATTTGCCTGGACATACTCAAGGACAACTGGTCGCCGGC
GCTGACCATATCAAAGGTCTTGCTGTCAATTTGCTCCCTGCTCACAGACT
GTAATCCAGCCGATCCGCTGGTGGGCAGCATTGCCACGCAATATTTGCAG
AATCGTGAGGAGCACGATCGAATTGCGCGTCTCTGGACAAAAAGGTACGC
AACAGCAAGCTTTCTAGACCAT
FMO07072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ubc2-RD | 1625 | CG6720-RD | 372..1067 | 9..704 | 3465 | 99.9 | Plus |
Ubc2-RC | 2111 | CG6720-RC | 305..1000 | 9..704 | 3465 | 99.9 | Plus |
Ubc2-RB | 1349 | CG6720-RB | 96..791 | 9..704 | 3465 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10766391..10766991 | 609..9 | 2990 | 99.8 | Minus |
2L | 23513712 | 2L | 1334347..1334718 | 282..653 | 495 | 75.5 | Plus |
2L | 23513712 | 2L | 10766189..10766278 | 696..607 | 450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:25 has no hits.
FMO07072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:09 Download gff for
FMO07072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
UbcD2-RA | 305..1006 | 9..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:34:24 Download gff for
FMO07072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
UbcD2-RB | 96..797 | 9..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:13 Download gff for
FMO07072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ubc2-RB | 96..797 | 9..710 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:13 Download gff for
FMO07072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10766189..10766275 | 610..696 | 100 | <- | Minus |
2L | 10766391..10766991 | 9..609 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:09 Download gff for
FMO07072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10766189..10766275 | 610..696 | 100 | <- | Minus |
arm_2L | 10766391..10766991 | 9..609 | 99 | | Minus |