FMO07076.5prime Sequence
647 bp (647 high quality bases) assembled on 2008-10-03
> FMO07076.5prime
CAGTCGACATGTGGTCCTCTAAGACTATTTTGGTTTTCCTAGCAGCATTT
ACTTTGGTCCAGGGTAGCATGCGGTTTCACTTCACCTTGGACTTTCACGT
ACAGCAGCCGCCGAATGCATCCGACACCATCGACAAGACCATTATTGTGG
AGAACGATCGGATATCTATGGTGGACAACGAAGGAGCGACTACTAAGGCT
CCGATGACCCAGTGGACAGATCAGGATCAGTATAATCAGGACGCATTGCT
GAAGGTGACCGATACGCGCAGATCGGTGCAACAGCTGAATACGGAGCTCT
CACCCCTGGTTGGCAGGAGCACCGATTTGGCCAGAAGGATTAAGCAGAGT
ATGCGATACGTCAACGAGGTGGATGCTAATCTGGACGATTTGAGCAACTT
TGGGCAGCTGGTGGAGCTGCTCAAGAAATTCGTAATCCTAGTCGATAACC
TAAGGGATCCAAACAATCTCGGAGGCATTCGAAGCCTGGAGTACGTACTC
CTGAAGTTGGCTCTAGAGAAGTACGACCTTCTGAACAAGCGACAGGAGAT
CGGTGAATACTTGGAAAGGGCGGAGAGTGCCTGGCGAAGATACCAAAACA
CACAGGTGGTTGTTCTGGATAACTCCACCGCAAGCTTTCTAGACCAT
FMO07076.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9837-RF | 2072 | CG9837-RF | 30..650 | 9..629 | 3105 | 100 | Plus |
| CG9837-RE | 802 | CG9837-RE | 30..650 | 9..629 | 3105 | 100 | Plus |
| CG9837-RD | 1488 | CG9837-RD | 568..1137 | 60..629 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8809101..8809669 | 629..61 | 2845 | 100 | Minus |
| 3R | 32079331 | 3R | 8809728..8809782 | 63..9 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:02 has no hits.
FMO07076.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:20 Download gff for
FMO07076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9837-RE | 22..650 | 1..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:19 Download gff for
FMO07076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9837-RA | 22..650 | 1..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:14 Download gff for
FMO07076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9837-RE | 22..650 | 1..629 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:14 Download gff for
FMO07076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8809101..8809662 | 68..629 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:20 Download gff for
FMO07076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4634823..4635384 | 68..629 | 100 | <- | Minus |
