Clone FMO07077 Report

Search the DGRC for FMO07077

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:70
Well:77
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17778-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07077.5prime Sequence

407 bp (407 high quality bases) assembled on 2008-10-03

> FMO07077.5prime
CAGTCGACATGGAGGCCACGCCGGGCTACCAGGACATCAGCGCTCTGGAA
AAATCGGTGGCCAATGCAGGATCGCAGCTGTACACGATGGCCCACAAACT
GCACGCGGTGGAGCGCAGCCTCGAACAGACGACGATGGAGCAGATGGACG
AGATGGAGGTCCTCGAGTTGCTCGAGTCGATGAGCGAGGTGACCAACGAG
TACCAGAATCTGCGCAAGGACATTCGCGAGGTGCAGCAGTTGCAGCGTGA
CGTCAGCAGCTCCATACGGTACCAAATGCGCAGCATGCAGCAGACTTTTC
ACACTCTAAAACAGCGGATAGCTAGCTCCCAGAAGGGTCGCAAAAAGCCC
GAGAAAGGGCTCGATGGAGCAGGGGTTGGTATTCATGAAGCAAGCTTTCT
AGACCAT

FMO07077.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG17778-RB 1344 CG17778-RB 396..776 9..389 1905 100 Plus
CG17778-RA 1119 CG17778-RA 171..551 9..389 1905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 495468..495801 56..389 1670 100 Plus
X 23542271 X 495070..495120 9..59 255 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:33:03 has no hits.

FMO07077.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:21 Download gff for FMO07077.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17778-RA 171..554 9..393 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:20 Download gff for FMO07077.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17778-RA 171..554 9..393 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:07 Download gff for FMO07077.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17778-RA 171..554 9..393 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:07 Download gff for FMO07077.5prime
Subject Subject Range Query Range Percent Splice Strand
X 495070..495117 9..56 100 -> Plus
X 495469..495804 57..393 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:21 Download gff for FMO07077.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 389103..389150 9..56 100 -> Plus
arm_X 389502..389837 57..393 99   Plus