FMO07079.5prime Sequence
353 bp (353 high quality bases) assembled on 2008-10-03
> FMO07079.5prime
CAGTCGACATGTCCGCTATTCTAAACCACGCAATTCGCCGCCAATTCGGC
GCTTCTGCCGCCCGGAATATGTCCGGCACCGCCGCCGTGGCCGGCGAGCA
CTCTGGTGGCTACAAGGTGTGGAAGCGCCTGTCCTTCTTCGTGGCCGTGC
CCGCCGTGGGACTGTGCATGCTGAACGCCTACCTGAAGCACCAGGAGGAG
CACGACAAGCCCCGCCAGGAGTTCGTCAAGTACGACTACCTGCGCCGCCG
CGAGAAGCGCTTCCCCTGGGGTGAGGGCCAGAAGAGCCTGTTCCACAACC
CCCACGTTAACGCCCTGCCCGACGGCTACGAGCACGCAAGCTTTCTAGAC
CAT
FMO07079.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| levy-RB | 490 | CG17280-RB | 52..378 | 9..335 | 1635 | 100 | Plus |
| levy-RA | 593 | CG17280-RA | 52..378 | 9..335 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23548537..23548767 | 105..335 | 1155 | 100 | Plus |
| 2R | 25286936 | 2R | 23548290..23548388 | 9..107 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:25 has no hits.
FMO07079.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:46 Download gff for
FMO07079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| levy-RA | 52..378 | 9..335 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:21 Download gff for
FMO07079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| levy-RA | 51..377 | 9..335 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:23 Download gff for
FMO07079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| levy-RA | 52..378 | 9..335 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:23 Download gff for
FMO07079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23548290..23548386 | 9..105 | 100 | -> | Plus |
| 2R | 23548538..23548767 | 106..335 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:46 Download gff for
FMO07079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19435813..19435909 | 9..105 | 100 | -> | Plus |
| arm_2R | 19436061..19436290 | 106..335 | 100 | | Plus |
