FMO07080.5prime Sequence
832 bp (771 high quality bases) assembled on 2008-10-03
> FMO07080.5prime
CAGTCGACATGAAATCCATGCTCATTTTCGGCCTTGTGGCGATGTGCGTG
CTGGTGGCCAACGCCAGTGAGGAGGCACCCAAGAAGGCCGTCGAGACCGC
CGAGCCCGCCGAGAAGAAGCAGGAGAAGCGCGGCATTGGCCACGGTCTGG
GCTACGGATACGGACCATCGGCGGGAGGCGCCATTCTGGGATCCGGCATC
GGTGTTGGAGTTCCAGTGGCTCCCGCTGTCGCTGAGCTGCCCACCCAGGT
GCACACCAACACCGTGGTGAGGACCGTGCAGGTGCCCTACCAGGTGGAGC
GTCACGTTCCCTACCCCGTCGAGAAGACCGTCACCTATCCCGTTAAGGTG
CCCGTGCCCCAGCCCTACCCCGTGGAGAAGATCGTCCATGTGCCCGTCAA
GCAGATCGTGAAGGTGCCCGTCGAGGTGCCCCAGCCCTACCCCGTCGAGA
AGGTGATCCGTGTGCCCGTGAAGATCCCAGTTGATCGTCCCTACACCGTC
CATGTCGACAAGCCATACCCCGTGCCCGTGGAGAAGCCCGTGCCATACAC
CGTCGAGAAGCGTGTGATCCACAAGGTGCCCGTCCATGTGGAGCGTCCAG
TGCCCTACAAGGTGGCCGTGCCCGTGCCTGTCCACGTTGAGAGCCACGTC
AAGCCCGCCGTGGCCGTCACCCACACCGTTGCCGCTGCTCCTGCCATCAT
CAGCCACGGCTACTCCGGACACGGAATCTCCGGATACGGAATTTCCGGAC
ACGGAATCTCCTCCTACGGCAGCTCCTCCTACGGCGGCTCCGCTCACGGT
GGCTACCTCCACAAAAGGAAGCTTTCAGACAT
FMO07080.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16885-RA | 1333 | CG16885-RA | 84..891 | 9..816 | 4025 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13933001..13933797 | 816..20 | 3970 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:07:54 has no hits.
FMO07080.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:17 Download gff for
FMO07080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16885-RA | 74..896 | 1..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:22 Download gff for
FMO07080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16885-RA | 73..895 | 1..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:59 Download gff for
FMO07080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16885-RA | 74..896 | 1..821 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:59 Download gff for
FMO07080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13932996..13933799 | 17..821 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:17 Download gff for
FMO07080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13932996..13933799 | 17..821 | 99 | | Minus |
