FMO07082.5prime Sequence
868 bp (25 high quality bases) assembled on 2008-10-03
> FMO07082.5prime
CAATCCACATGTACTATCCGAGGTGCAAAGACCTTGGCCGGGACTATTTT
CCCATCTATCATACGACCAGGTTTCAGGATCAGCCGGAACCTAATTTGGC
CGTGCTACAACACTTTGTTCGGGTGACCAATCACCATGGCAGGGAACTGA
CTGAGGTCAGGGCATCACTGTGGACCACTTGCGCTACGGAGAAGGTCGTC
AGTTGGTGGATGTGTTCTACAGCGAAAAGACCACCAACCAGGCGCCGCTT
TTCTTCTTCGTGCACGGCGGCTACTGGCAGGAGATGGACATGAGCATGTC
CTGCTCGATTGTGGGTCCCCTGGTGCGGCGTGGATACCGAGTGGCCGTCA
TGGACTACAACCTGTGCCCGCAGGTCACCCTCCAGCATCTGATGACCCGT
TTCACCCATTTCCTCAACTGGATCTTTGACTACCCCCAATTGACCAAAGT
GTCGGCTCTCACCTTCGCCGGACTGTCGGCTGGTGCCCACTTGCTGGCCC
ATATACTCATGCCCCCTAATGTGATTACAGCCCAACGCAACAAGATGGTG
TGGGCTTTGATCTTCCTCTGCGGCGTTTACTATCTGAGGGAGCTCTCTAA
CTTGGAATCGGTTAATCCCAAAAATATTCTGGGCCTCAACGAGCGGAATA
TCCAGTCCGTGTCGCCCATGCTGTGGGAATACACCGATGTTACCGTTTGG
AACTCCACCAAGATCTACGTGGTGGCCACCGAGCATGACAGCCCTCCTTC
ATCGAGCAAAGTCTCCACTACAACGATGTGCTGAGAAAGAAGGGCTACAA
GGCGAGCTTTACGCTCTTCAAGGTTACGACCTCTTCGACATCATCGAGGA
GACGGCCATCGACCATTC
FMO07082.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| KFase-RB | 1363 | CG9542-RB | 206..1068 | 9..868 | 3655 | 95.1 | Plus |
| KFase-RA | 1002 | CG9542-RA | 65..927 | 9..868 | 3655 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6487637..6488372 | 868..136 | 3065 | 95.4 | Minus |
| 2L | 23513712 | 2L | 6488430..6488551 | 130..9 | 520 | 95.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:11:13 has no hits.
FMO07082.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:41 Download gff for
FMO07082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| KFase-RA | 65..927 | 9..868 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:03 Download gff for
FMO07082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9542-RA | 65..927 | 9..868 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:17 Download gff for
FMO07082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| KFase-RA | 65..927 | 9..868 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:17 Download gff for
FMO07082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6487637..6488372 | 136..868 | 95 | <- | Minus |
| 2L | 6488425..6488551 | 9..135 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:41 Download gff for
FMO07082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6487637..6488372 | 136..868 | 95 | <- | Minus |
| arm_2L | 6488425..6488551 | 9..135 | 93 | | Minus |
