FMO07084.5prime Sequence
386 bp (386 high quality bases) assembled on 2008-10-03
> FMO07084.5prime
CAGTCGACATGGCATCGATCTGTGGACGCATGGCGCTCCGTGCCGCCGCA
CGCCAGAATGTTGCCTACACGCCCGTGCGCTTCTGCAAAATGATGAACGA
TCCTTTGGAGCACGCCACTGGTATCGAGAAGCGCGAGCTGCTGCTTAAGG
CCGCCGGCAATGATAACCCCTTCGACATGAAGGTCTTCAAGCGGGGCGCC
GGCACCAAGGAGAACCCCAACCTTATTCCATCGGCCTTCGATGCTCGCAT
TGTGGGCTGCATCTGCGAAGAGGATCAGACCTACGTGCAATGGATGTGGC
TGCAGAAGGGCAACCAGAAACGTTGTGAGTGCGGCCATTGGTTCAAGCTG
GTGGAGAAGGCAGCTGTTGCAAGCTTTCTAGACCAT
FMO07084.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoVb-RB | 570 | CG11015-RB | 104..463 | 9..368 | 1800 | 100 | Plus |
| CoVb-RA | 729 | CG11015-RA | 104..463 | 9..368 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6558418..6558592 | 91..265 | 875 | 100 | Plus |
| 2L | 23513712 | 2L | 6558939..6559042 | 265..368 | 520 | 100 | Plus |
| 2L | 23513712 | 2L | 6557903..6557984 | 9..90 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:13 has no hits.
FMO07084.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:28 Download gff for
FMO07084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoVb-RA | 104..474 | 9..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:16 Download gff for
FMO07084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11015-RA | 104..474 | 9..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:33 Download gff for
FMO07084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoVb-RA | 104..474 | 9..380 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:33 Download gff for
FMO07084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6558418..6558591 | 91..264 | 100 | -> | Plus |
| 2L | 6558939..6559053 | 265..380 | 95 | | Plus |
| 2L | 6557903..6557984 | 9..90 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:28 Download gff for
FMO07084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6557903..6557984 | 9..90 | 100 | -> | Plus |
| arm_2L | 6558418..6558591 | 91..264 | 100 | -> | Plus |
| arm_2L | 6558939..6559053 | 265..380 | 95 | | Plus |
