FMO07085.5prime Sequence
551 bp (551 high quality bases) assembled on 2008-10-03
> FMO07085.5prime
CCTATACGAAGTTATCAGTCGACATGTCGCTGCTCCGTTCGAAATACTAC
GACCATCCCGATGGCGAGGATGCCTTTGGCAAGATCGTGGCCACCAACAA
GTACGCGGTATCCGCCGGCGTGGCCTGGTCCATGTTCGACGTCCTGACGC
TCTCCAAGCCGCAAGGATATCTGCCCACACTGGGCCGTTTCGCCTACAAC
ACGGGTCCGCTGATGGGCATGGCCACGGCGTTCACTCTGACCACCCTGGT
GGCCACAAATGCGCGCGGCAAGGACGATAAAATCAACTACCTGATCGGCG
GTTTTGCGGCTGGCGGCGTCTTTGGAGCCTGGAAACACAACCACGTAGCT
GGTCTGTGCGCCGGCCTCTTCCTGGGCATCGCTGGTGTCATCAAGAAGAT
GTCCATTGAACAGGGCTGGGAGTTCTTCCCAAACACACCGATCAAGCAGT
ATGGTGGTCTGAACATTGCCGGAAACGACTGGACCATCATGGCCGATCCT
CCCAAGAACTGGACCACGGAAAAGCCAAAGGAGGCAAGCTTTCTAGACCA
T
FMO07085.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9350-RA | 712 | CG9350-RA | 89..599 | 23..533 | 2555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21025346..21025603 | 23..280 | 1290 | 100 | Plus |
| 2R | 25286936 | 2R | 21025815..21025973 | 375..533 | 795 | 100 | Plus |
| 2R | 25286936 | 2R | 21025661..21025756 | 281..376 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:40:11 has no hits.
FMO07085.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:39 Download gff for
FMO07085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9350-RA | 81..604 | 16..538 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:37 Download gff for
FMO07085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9350-RA | 79..602 | 16..538 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:00 Download gff for
FMO07085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9350-RA | 81..604 | 16..538 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:00 Download gff for
FMO07085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21025341..21025603 | 16..280 | 98 | -> | Plus |
| 2R | 21025661..21025755 | 281..375 | 100 | -> | Plus |
| 2R | 21025816..21025978 | 376..538 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:39 Download gff for
FMO07085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16912846..16913108 | 16..280 | 98 | -> | Plus |
| arm_2R | 16913166..16913260 | 281..375 | 100 | -> | Plus |
| arm_2R | 16913321..16913483 | 376..538 | 98 | | Plus |
