FMO07089.5prime Sequence
1168 bp (1040 high quality bases) assembled on 2008-10-03
> FMO07089.5prime
CAGTCGACATGCTTCAGCGCAGCGGAAGATCCTCGAATGTTAGTACGGCC
CTGCGTCTGTTGGGCGCCAATGTGGAGTTGTTCGGTGTGCTCACCCGTAA
TCCCACCTATCGCATGATTCTGGATGATCTCGAGCAGCGGGGCATTGATA
TTAGCCATTGTACATTCACGGACGCAAGTCCTCCCTTTTCCACAATTGTC
CAAGATCGCTGGACGCGTCGTTGCACGGTGGTGTATTGCGACAAGTCATT
TCCATATGTTACGGCAGCGGATTTTCGCAAACTGGATCTCGATCAATACG
GCTGGGTGAATTTTGAGGCACGGAGTCCACGTGAAACTTGCGATATGATA
CGCCTAATCCTCGATCACAACAACGGGCGGGATGAACGGGATCGGATAGT
GGTATCGTTGCAGATTTTCAATTCCTTCGAACAGGTCGTGCATCTGATTG
CCATGTGCGACTATGTGTTCGTCACCAAGTATATAGCCGAGTCCAGAGGC
TGGAAGTCACCGCTGGAAGCCTGCGAGGGTGTCAATGCGCTACTGCGCAT
GCCAAGGAACATTAGAATTCGCAGACCCTGCATCATTGTGCCGTGGAGCA
GCCTGGGAGCAGGATGTATGACCACGGAAGGGGAGTACTTCGAAGTGCCA
GCACACAAGCCGAAAAAGATCATCGATCGGGTGGGCGATAGTGATTGCTT
CACGGCGGGCTTCATTTATGCCGCTTTTGTGCGGCAAAGGCGATTGGCCG
AAGCCGTGGACTTCGCCAATGCTGTGGCCAGCTATAAGTTGGGCTACGTG
GGTTTCGATTGCCTGGGTCATTTGCCAATCGATGCGGTTAAGCTGCCCGT
TAGAATGAGGTGTGGCAGTGAGGTGTCCTCCGACGATGAGGATAACGGCG
ATCAGTTGAATACCTGCAAGAAGCACCTGTTACGCCGATTGAAGTCCTGC
CGGAAAAGTCCTCCATTGCACCCACTGAGAAGAAGTTCCGATCGAGACTT
CGCAACTTTCTAGCGCAAGCTTTCTAGACAATCGTTTGGCGCCCGACCCA
GGTAAGTGGTCATAATCATAAACCATAATCTAATCATAATCACAAACTTA
GCTAAGGAGATCTGGTCATGAACATAGTGGTCTGGAATTTTCAACAAAAA
AAAAACCCCGGGCGCAAC
FMO07089.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12289-RA | 1395 | CG12289-RA | 305..1312 | 9..1014 | 4900 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11457159..11458166 | 1014..9 | 4850 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:07:57 has no hits.
FMO07089.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:19 Download gff for
FMO07089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 296..1312 | 1..1014 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:40 Download gff for
FMO07089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RB | 130..1144 | 1..1014 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:00 Download gff for
FMO07089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 296..1312 | 1..1014 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:00 Download gff for
FMO07089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11457160..11458171 | 1..1013 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:19 Download gff for
FMO07089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11450260..11451271 | 1..1013 | 98 | | Minus |
