FMO07091.5prime Sequence
1150 bp (999 high quality bases) assembled on 2008-10-03
> FMO07091.5prime
CAGTCGACATGGAGAATTTCCTGCGGGGCACGTTGTCCAAATGTCTGGAC
TGTGTAATCACGGATCAGATGTTGGCGGCCATACTGAACATCAAAGACGA
CTATGAATTCGACAACTACTTTGGCAATTTACTGAGCGAGGACAACGAGG
AGCACCGCATGTTTCTTGTAAACTGTCGCCGGATGCTACTGAGTGGCAAA
CAGCCGCGGAACAATGGAAAATATCTCTCGCCCCCTCTGGCACCCACATC
ACCCAATTGTCCCAAGCAAAATATCAGCAAGGGTGCCAAGGGCAAGTCAG
GGAAACACGTGAATCTGTACGCCAGCGATGGTCGCGTCCAGGGCGACACC
ATAATTCTTAAGGGTCGGCGGCATTGCGATTGCCAGGCGGGCCAGCACAA
GTTGATCAACAATTGCCTGGGCTGCGGCCGGATCGTGTGCGAGCAGGAGG
GAAGCGGCCCTTGCTTGAGCTGCGGCGATCCCGTGCGCACGCCCGAGGAG
GAGCAGCAGCTGGCCAAGGCGGCCAGGGAGAAGGGCGGCACGAAGAGCGC
CGCCAAGCAGGGCAAAAAATCCACCAAGGAACTGTCCACGCAGGCGCTGG
ACAAGGCCTTGGCCCAAAGGGATCGTCTGCTGGAGTACGACAAGAACAGC
GAGAAGAGGACCACAGTTATCGACGATGAGCTGGACTACTTTCAGGAGAA
CTCCGTGTGGCTGAGCGACGCTGAGCGCGAAAAGTTTGAGAAACTGCACC
GAGAAATGGGAGGAGGTAAAGCACGGCAGTCGCATGAAGCGGAAGCTCCG
GGTGGACTTCGCTGGCCGAGAGTTGCCGGAGGAACCGACCATCTCCAAAG
AGTACGAGCAGCAGTGATCAGCGAACTAGCAGCCGTTTCTAAAGCCTCGG
GTGTTGGATCCAACTGGAGTGCATCCTCGGTCACCGGGCCACTCCGCTTG
ACACTGGCACCACATTTGAACATGACCAAGCCGCCGGTCTACAGCCCAGT
AGAATCCAAGGGTTGGCAGCTCCTGCAGCAGGCACGAATGGCTGGAGAGG
ACCTTCAATCGGTGCAGGACAAGGACCTGCTGGAAATGCAGGACATGGCC
ATGTGTCTTGTCATATATTGCACATCACCACGCCCTGAGCCTCTCTCGCC
FMO07091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11710-RC | 1903 | CG11710-RC | 100..1209 | 5..1108 | 5185 | 98.4 | Plus |
| CG11710-RA | 1766 | CG11710-RA | 100..1209 | 5..1108 | 5185 | 98.4 | Plus |
| CG11710-RB | 1779 | CG11710-RB | 100..1209 | 5..1108 | 5185 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20428818..20429437 | 696..77 | 3100 | 100 | Minus |
| X | 23542271 | X | 20428292..20428705 | 1097..690 | 1525 | 96.2 | Minus |
| X | 23542271 | X | 20429502..20429574 | 77..5 | 350 | 98.6 | Minus |
Blast to na_te.dros performed 2014-11-28 18:58:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 10331..10370 | 546..585 | 110 | 75 | Plus |
FMO07091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:44 Download gff for
FMO07091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11710-RB | 97..1212 | 1..1112 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:43 Download gff for
FMO07091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11710-RA | 23..1138 | 1..1112 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:37 Download gff for
FMO07091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11710-RB | 97..1212 | 1..1112 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:37 Download gff for
FMO07091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20428278..20428699 | 696..1112 | 95 | <- | Minus |
| X | 20428819..20429437 | 77..695 | 100 | <- | Minus |
| X | 20429503..20429577 | 1..76 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:44 Download gff for
FMO07091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20299305..20299726 | 696..1112 | 95 | <- | Minus |
| arm_X | 20299846..20300464 | 77..695 | 100 | <- | Minus |
| arm_X | 20300530..20300604 | 1..76 | 96 | | Minus |
