Clone FMO07092 Report

Search the DGRC for FMO07092

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:70
Well:92
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10396-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07092.5prime Sequence

554 bp (554 high quality bases) assembled on 2008-10-03

> FMO07092.5prime
CAGTCGACATGAGCTTATTTCCCTGTATGAAATTGAGGAAACTTTTCCAG
ATGACGAGGCGTCGGTTTGCCAGTGGAGGAGATGGTATTCGACTTATGGT
CGCCGATCGCCAGGTCGTTGGTCATGGAATCAATGGGCGACCCATATACT
TCGATAGTCCGGACTGCCCTTTTCCGGCTATTCGATATCGGGAGGTTAGC
CCAGAGTTGTGTGCCCTACGTGAAAAGGAGTTGGACGACTGGAAGAAGCT
GTCGCTGGATGAAAAGAAGCAATTATACCGATATAGCTTCTGCCAAACAT
ATGCAGAATTCCAGCACATTACACCCGAATGGAAGATGTGTCTGGGCGTC
GCTTTGTGGCTTGTGTCAATCGGAATCGCGATATCGATAACTATGAAGAC
CGTTCTCTATGGAAAACTGCCGGATACGTTTAACGATGAGCGCCAGTCGG
CCCAATTGCGGCGCATCATCCAGCTGCAAATGAACCCAATTACTGGACTA
GCGTCCAAATGGTGCTACCGAGAGAACAAGTGGAAGGCAAGCTTTCTAGA
CCAT

FMO07092.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10396-RA 667 CG10396-RA 63..596 3..536 2640 99.6 Plus
CG10396-RB 672 CG10396-RB 113..601 48..536 2430 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5354119..5354652 3..536 2640 99.6 Plus
Blast to na_te.dros performed on 2014-11-28 22:14:56 has no hits.

FMO07092.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:04 Download gff for FMO07092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10396-RA 61..600 1..542 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:44 Download gff for FMO07092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10396-RA 61..600 1..542 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:16 Download gff for FMO07092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10396-RA 61..600 1..542 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:16 Download gff for FMO07092.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 5354117..5354656 1..542 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:04 Download gff for FMO07092.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1241622..1242161 1..542 98   Plus