FMO07095.5prime Sequence
1096 bp (982 high quality bases) assembled on 2008-10-03
> FMO07095.5prime
CAGTCGACATGGATGCTCAAGGAGACCAGGATATGCGGCTGGATCCGCCG
CTCTTTGTGACCTGTGACATGGAGCAGTTTCGCGATCCAAACAAGAAGCG
TGCCGCCAACGATGCCTGCGAGGAGCTGGACAAGCTGGATGCCCAGGACG
AGATCAGTGTGTCGAGTATCATTTCGGCGCTATTGAGACCGATTGAGCCC
TCGGACGATCAGTACAAGGTGTGCGACTGGGGCATCAATCCCAAGCAGTT
TATGCCCACCAAACAGGCGATCATTTTCAAGGAACAGTTGTTCATATCGA
AGTTGCGGAATACAAATTGCAAGCTAAATGAAAATCTAAAAATCTTCTTT
GAGCGGGAACTTGAGCAGATTGGACGCTTCTGTTTGAATGTGGAGGAATC
CTTTGATGGCTATGTGATCTTCAGCAGCAGCAAAATGAAGAAGGGCAAGG
GTATGACGGAATGTGGTCACCAGTTAAAGGGGAAGTACGATGACAAGTTC
CTTCTCATCTGCGAGAAGAGATCGGAGTTCGACCGAATCGACAATACTCG
GGTAGAGAAGACGCTGGAGTTGCGAAACCATGCCGATTTGATGCTAACCG
CCATTCGCGAAACCAAAATCAATGAGGAAGTGCAGCGCTTCAAGGCTCGC
ATCGATATCAAGGATCGCGATCATGTGTTCGTCCTGGATGGCGGGATTAT
GCTGCTGATGCGACACCTAGTGTGCAACAATTTTGTGGGCAACTTCGAGT
ACTACACAATGCATTTGTATGGCCGGGTCCTTCGCTGCAATCTGGTTGTT
TCCAAGGAGCGCAAGGAGGTGCGAATTTTCTATCGCACATACAAGAATGT
CGTGCACATCTTCACCCAGCAATGTTTCAACGATGAGCTCCAGGACGTGG
CCGAGACCTTCATGACTCCTGAGGGCCGGATTGTTCTTGCATTATGGCGT
GCTATAACTACCTTTGCATGCCGCCTGCATGCCACCGAGAGGATGAACCT
ATCCTACCCAAATTGACTAATGTGGCGCCAAACGAAAGCTTTCTCGCAGT
CTGGGCTCAAGCCCTCATAACAGAAACGCCACAGCTCTGACACATC
FMO07095.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13243-RB | 1467 | CG13243-RB | 106..1153 | 9..1048 | 4945 | 98.7 | Plus |
| CG13243-RA | 1421 | CG13243-RA | 106..1153 | 9..1048 | 4945 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15852752..15853778 | 12..1032 | 4725 | 98.2 | Plus |
Blast to na_te.dros performed 2014-11-28 22:46:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 1579..1617 | 514..552 | 114 | 76.9 | Plus |
FMO07095.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:34 Download gff for
FMO07095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13243-RA | 99..1169 | 1..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:25 Download gff for
FMO07095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13243-RA | 18..1088 | 1..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:46 Download gff for
FMO07095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13243-RA | 99..1169 | 1..1060 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:46 Download gff for
FMO07095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15852750..15853812 | 8..1060 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:34 Download gff for
FMO07095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15852750..15853812 | 8..1060 | 98 | | Plus |
