Clone FMO07096 Report

Search the DGRC for FMO07096

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:70
Well:96
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14921-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07096.5prime Sequence

747 bp (747 high quality bases) assembled on 2008-10-03

> FMO07096.5prime
CAGTCGACATGGTACAGATTTCGCAGACAGAGGAGGACATCAAGATCTCC
ATCGAACTCAATCGTCTGGTAACCCGCAAGCCGGACGTTGTTCTCCTTCC
GCAGTACTTAAAGTTCAACAATCCACCCATCTTCTTTGAGCGTCATCTGG
CCCAGGAGATCGACGAGATGGCCAGCTTTTGTCGCATTTTTAAGAACGAA
GCCCGCATTGTGCTGGTTAAGAAAGAGAAGGGCTTATGGCCTGAGATGTT
CCAGAAGCTGGACAAGGAGGCACTCATGCAGAAGCGCCTAGAGATCGCCG
ACCTCATCGTGGAGCGCAACAAGAAGCGGGATGAAAAGGCACTGGAACGT
TACGATAACAAGCGGCGGGCGGAGATCCAGAAGGAGATCCAGCGGGAGAC
AGATATGCGCGAGCGTGTGAAGCAGTTCCAGGAGAACTCGGTGCGCGAAG
CTCTGGTAGTGGATGTACGCAAGGAGGCGAAAGCTACGCCCAAGCCAGAT
ACACTGCAGTATCCGCCATCGTCGGGAGGCGCCAGTCGCCTGGCCACGCC
CCTCATGCGTCCGCCCATGAGCTCCGTTCGTGGCAGCGGACGGATCAACG
TAAACTTCACCACACAGCACAAGCGGGTCACGCCGAAGCGGGAGTCGCAG
GCCGCTATGGAGAAGGCATATGCCGCCGCCGGTGGACCCAATGCGAATGT
TCCAGTCGCCGATGGAGAGCGTCGATGAAGCAAGCTTTCTAGACCAT

FMO07096.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14921-RA 953 CG14921-RA 129..849 8..729 3585 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11120746..11121301 729..173 2735 99.8 Minus
2L 23513712 2L 11121419..11121586 175..8 840 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:30:11 has no hits.

FMO07096.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:32 Download gff for FMO07096.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14921-RA 90..826 1..738 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:26 Download gff for FMO07096.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14921-RA 90..826 1..738 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:39 Download gff for FMO07096.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14921-RA 121..857 1..738 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:39 Download gff for FMO07096.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 11120738..11121298 176..738 99 <- Minus
2L 11121419..11121589 1..175 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:32 Download gff for FMO07096.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11120738..11121298 176..738 99 <- Minus
arm_2L 11121419..11121589 1..175 97   Minus