FMO07101.5prime Sequence
1222 bp (1035 high quality bases) assembled on 2008-10-06
> FMO07101.5prime
CAGTCGACATGAATTATTTAAGAGTAATTCGGAATAATTGGAAGAAATGC
ACGTTCGGAGCGGCAGTGTCTGTGTATGCGCTGCAAGCGCTGAAAACTCA
CATCGAGATTGAACAACATATGCGGGAATTCGCCTCCAACATTCAGGCCA
ACTGGATATCGGATCGCCCCAAAAAGGTACTGGTGGTCATGAATCCGGTG
GCCAACAAGAAGAGATCGGAGAAGTTTTTTAAGAACTACTGCGAGCCGGT
TTTGCATTTAGCTGGATATTCGGTGGAGATCCTTCGGACGAATCACATTG
GTCATGCCAAAACCTACGTGGAGGAGTTGGCAACGCTACCCGATGCCATT
GTTGTTGCCGGCGGCGACGGCACCTCATCGGAGGTGGTCACTGGGCTGAT
GCGTAGGCGCGGCAATCTCTGCCCGATCACCATCCTTCCGCTGGGACGTT
CGGTGCAGTCCGCATCCAAGCGCATCAACATCTTTGGCGTCAAGGACGTC
GACTATGTGAAAAGTCTTTCGAAAGCCCTTGAACCTATGCTCAAGGATGA
GAGCCAGTACCAGAGTGTGATCCGCTTTGATGTGATCAATGAAGAAGATG
GCAGCAATAGCCAATTGAAGCCCATATTCGGTCTTAATGGTCTGTCCTGG
GGTCTGCTGGAGGACATCGATGCGGCAAAGGATAAGTACTGGTACTTTGG
ACCACTGCGACACTACGCTTCCGCTGCGTCCAAGTCCTTTGCCGATAACT
GGAGCCTTAAGACCGACTATGTGTACACACCGCCGTGTCCTGGCTGCGTT
GACTGTGCTGCTACTGTACAGCGCCAGGAGACCGCCCAGCCTTCTGGCCT
CTTCACCAGAGGCCTCATTAATTACAAGAATAATCCGGGTGAAACCAAGA
GGCCGCTAGTCAAGAACGACCATTGCAGCAGAAGTTCGAGGGAGCGCTGA
GCCAGCCAGATAAACATCAATTGTGTTCAAACAAGGATACTTTGCGGAAC
TGGAAAGTCAGTTTATAAGCTCCCTGCGAGCCGGGCCTGGGGAGTTATTA
GCAATTCCGGGAGTCACGTGCAGCAAATTTAACCCAGCTTGGTGGTTTAG
AGCAGGACTATCACCTGCCTCCGGATGTCAATGGGCGATAGGTTTTTATC
TATCGATGCCAGAATAGTCTATGCCGACATTAAGGATCTGTGTGTCTCCA
CAGTTGCATTAAGTTTGTTGTG
FMO07101.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mulk-RA | 1300 | CG31873-RA | 65..1223 | 9..1158 | 5120 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10270449..10271355 | 228..1127 | 3775 | 96.7 | Plus |
| 2L | 23513712 | 2L | 10270274..10270394 | 107..227 | 605 | 100 | Plus |
| 2L | 23513712 | 2L | 10270115..10270213 | 9..107 | 465 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:26 has no hits.
FMO07101.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:32 Download gff for
FMO07101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mulk-RA | 65..1195 | 9..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:42 Download gff for
FMO07101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31873-RA | 25..1155 | 9..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:47 Download gff for
FMO07101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mulk-RA | 65..1195 | 9..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:47 Download gff for
FMO07101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10270115..10270212 | 9..106 | 97 | -> | Plus |
| 2L | 10270274..10270394 | 107..227 | 100 | -> | Plus |
| 2L | 10270449..10271338 | 228..1111 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:32 Download gff for
FMO07101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10270115..10270212 | 9..106 | 97 | -> | Plus |
| arm_2L | 10270274..10270394 | 107..227 | 100 | -> | Plus |
| arm_2L | 10270449..10271338 | 228..1111 | 97 | == | Plus |
