FMO07106.5prime Sequence
814 bp (814 high quality bases) assembled on 2008-10-06
> FMO07106.5prime
CAGTCGACATGTCCCGCTCCCTGCAACGCTTAGTGGGCAGCTGTCGTCGC
TGGGCACAACAGCCCGCAATTCGTCATTATGCCGCTCCCGCAGATTCCAC
TAAAGGCAAGGGTCCGATCTCTTGGAGAAGTCTGGCCGTCATTGGAGCCC
TTGGAGCCGGAGGAGTGGGCTTCATGCTGTACGTGAAGAGCGAGAAGGAT
GAGGCGAGAATGAAGGAGCGTCAGCGGCAATTGGGAAAAGCAGCCATCGG
CGGCAGTTGGGAATTAGTTGATTCGCAGGGAGCTGTTCGCAAATCGGAGG
ACTTCTTAGGCAAGTGGCTGCTCATCTATTTTGGCTTCACCCACTGCCCG
GATATTTGTCCCGATGAGCTAGAGAAGATGGCCGCCGTCGTCGATGAAGT
TGAAAAGTCCCCGCAAACGCCAGCAGTGCAGCCCATCTTTATCACCGTTG
ACCCAGAACGTGACTCCAAAGAGGTGGTGGCCAAATACGTAAAAGAGTTC
TCCCCCAAACTGCTGGGACTCACGGGAACCGTCGAACAAATCCGCAAAGT
GTGCAAGGCCTTCAGGGTTTATTTCAGCGCTGGACCGCGGGACGAGGACA
ACGATTATATTGTGGATCACACCATCATCATGTACCTGGTCAATCCCGAT
GGCGAGTTTGTCGATTACTACGGCCAAAATCGGGACAAGGACCAGTGTGT
GGCATCCATTTTGGTGAACATAGCCAAGTGGAATTCAATGAACAAAAAAG
GGATGGTTCAGCGCAGCTTTCTAGACCATTCGTTTGGCGCGCGGCCCAGG
TAAGTGGTCATAAT
FMO07106.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Scox-RA | 1041 | CG8885-RA | 111..863 | 9..762 | 3745 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4968432..4968825 | 402..9 | 1970 | 100 | Minus |
| 2L | 23513712 | 2L | 4968010..4968369 | 762..402 | 1755 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:51 has no hits.
FMO07106.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:02 Download gff for
FMO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scox-RA | 105..866 | 1..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:46 Download gff for
FMO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8885-RA | 106..867 | 1..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:50 Download gff for
FMO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scox-RA | 105..866 | 1..766 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:50 Download gff for
FMO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4968010..4968368 | 403..762 | 99 | <- | Minus |
| 2L | 4968432..4968831 | 1..402 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:02 Download gff for
FMO07106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4968010..4968368 | 403..762 | 99 | <- | Minus |
| arm_2L | 4968432..4968831 | 1..402 | 99 | | Minus |
