FMO07107.5prime Sequence
1200 bp (1013 high quality bases) assembled on 2008-10-06
> FMO07107.5prime
CAGTCGACATGACGTCGTGGGGCAATATCTGCCGCATCTGCAGCAGCCCC
GCAGACTACGAGATATTCGCCAAGATTCCCACGTATTTGCACGGCTCCAC
AAACGAGTTTCTCAACTGGCAAAAGCCCATAAACGTTCTGCTGGAGGAGA
CGACGGGCCTGAAAAACTCCACGGACGACGGACTGCCACGCAACATATGT
GCGCCGTGCATCTCCTATCTCAAGCATGCCGTCACATTCCGGGAACAGTG
CATCAAGAACGCGCTGAGTCTCAAGCTGGCGGAGCTCTACCAGCAGAAGA
GGGTCAACGTTTCGGATGCGAACAAGATGGACAAGGAGAGCGCCCTCTTC
ACGGCGGAGGATCTGAATTATGTGGAGCAGAGGCCAGTGCATAATCTTCT
GCTAAACAACAGCGCCAACAAACTGGAGTCATCCAAGGACAAGGTACACA
AGCGACTGCTCAATCAGACGACTACCCAGCTAGACGGCAATGCTGAGCAG
AAGATCCAGTACTTAAACGTGCTGTTCAACAAGCAGCAGCCTCACAACAG
CATGCCCAGGCAACCGCGGGATGGCGAACTGCCATCGAGCAGTGGCCAAA
ATGACGACGAAGATGACGACTATGCGGTGGCCAGTTCCAGCGACGACAAC
GAGGAGGCGGCCCTGCTGCGCAAGCACAAGAACTGCTATAACTACACCGA
GACCAACTTCGAGGAGGACGATCCCATGGAGCAGGATCAGCTGCAGCTGC
GCGACATCAAAGTGAACATACCGGAGCCCATGTGGAAGGAGCGCAAGTGT
CCGGCATGCTCCAAACGCTTCATGTTCGAGGACTCGCATCAGTCGCATCT
GGACAACTGCGTCGAATACCAGTTCGTCACGTTTGTTACCGAGGTGACCA
AGTTGCTCGAGATTAGCGACAGAAAATGGTCTCGCCGCACGAGTTCATCC
GCCGCATGATATTCGCTCTGCACAAAACTTGCGCCTGCTGCAGGAACATT
CCATAGACTCGCTTCTACGAAAGCTCATCAAGTGAAGGTGTCACCGGTGA
GAAGATGCCTGACCGCAATCCCATAGAATATACCCGATTCCGCCGGTGAG
ACCATCCAATCGACTGTCACGGACGACCACTCGATCCGAGAAACACGTCG
TAGCTATGAGGCACTGGAAGTGCATTCCAGGCGCCGCAACGTGAATAAAA
FMO07107.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15435-RB | 1948 | CG15435-RB | 250..1350 | 9..1098 | 5115 | 98.3 | Plus |
| CG15435-RA | 1807 | CG15435-RA | 109..1209 | 9..1098 | 5115 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4460204..4461057 | 165..1016 | 4170 | 99.8 | Plus |
| 2L | 23513712 | 2L | 4459978..4460133 | 9..164 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:27:55 has no hits.
FMO07107.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:34 Download gff for
FMO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 106..1187 | 2..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:47 Download gff for
FMO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 141..1222 | 2..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:33 Download gff for
FMO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15435-RA | 106..1187 | 2..1077 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:33 Download gff for
FMO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4459975..4460133 | 2..164 | 97 | -> | Plus |
| 2L | 4460204..4461126 | 165..1077 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:34 Download gff for
FMO07107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4459975..4460133 | 2..164 | 97 | -> | Plus |
| arm_2L | 4460204..4461126 | 165..1077 | 98 | | Plus |
