FMO07110.5prime Sequence
992 bp (992 high quality bases) assembled on 2008-10-06
> FMO07110.5prime
CAGTCGACATGTCAGACTCTGAGAAGGAGGCCGCCGGCAAAGCCCACCTG
GGAAGCAACAATCGGTGGTCCGACCTGGAGGAGGAGGAGGAGGGTGAGGC
GAACGACCAGGGAGGGATCCAGAACTTGAGGCCGGAACTCGTTGTGCCCA
GAACCACAGCTGCATCGGATGTTGAGGAGAATTTACCATTGGGTTCTCCG
AGTGATGGGTCCAAACGCGCTACGAGTAGAAACCGCAGACTGGAATACTT
TCGCAGTGGAGCCGATGCCGATTGCCAGGTGCACGTCCTGAGCAACTGCC
CCCAATCCGATGAGCCGGCGGTCAGTGTGTGCTACAAGAAGTTTGGCTGC
CATCGGATCTTCCTGGCCACCGCCTCCGACAAACTGGAGCAGGACGTGTA
CCAGAACAAGGACTGGAACGGCGTACTCCAGATCAATGGGGTTTCGCCCG
AGAGCGTGGAGATCTTCCTGGAGTTCATATACACCTTCGAGGTGACCTCG
CCGCTGGTCCAGCTGAAGCTGGTGGGGGATATGTTCATCCTGTCCTGCGC
GTACAACATGCCGGAGCTCCTTCGCTCCTTTGCTGAGAAACTAAAGGAGC
AGGAATTGCCTCTGGATGGCATCTTTCCTGCCTTCGACCTAGCATTCCGG
CATAACATCATCGATGTGGAGCGCGTTTGCATCGAGAAAATCATAGAGGA
AGGCGCATCATTGATCCACGAACCCAGTTTAATGAAACTCCCGGTCTATG
CTCTAAACTACGCCATCCAGCACTGGCTGGTGGCGGATGCAGTGCCTCCC
GATGAACTCATCACGATTTTAAAGCAGTATCAGGAGATCAAATGAGATTA
CATTCGCCAACACGCAAAAATTCCCGCACTTCACCAAAATTATCAAGTAT
TTCCCCAATGTTCTTCTGGACGCCGAGGGATTCATCAATCAAAACGCAAG
CTTTCTAGACCATTCGTTTGCGCGCGGGCCCAGGTTAGTGTT
FMO07110.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14262-RA | 1004 | CG14262-RA | 25..960 | 9..945 | 4630 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27264729..27265406 | 686..9 | 3360 | 99.7 | Minus |
| 3R | 32079331 | 3R | 27264418..27264677 | 945..685 | 1255 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:17 has no hits.
FMO07110.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:24 Download gff for
FMO07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14262-RA | 20..960 | 1..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:27 Download gff for
FMO07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14262-RA | 20..960 | 1..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:20 Download gff for
FMO07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14262-RA | 20..960 | 1..945 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:20 Download gff for
FMO07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27264418..27264675 | 687..945 | 99 | <- | Minus |
| 3R | 27264729..27265411 | 1..686 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:24 Download gff for
FMO07110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23090140..23090397 | 687..945 | 99 | <- | Minus |
| arm_3R | 23090451..23091133 | 1..686 | 99 | | Minus |
