FMO07113.5prime Sequence
680 bp (680 high quality bases) assembled on 2008-10-06
> FMO07113.5prime
CAGTCGACATGGAGCTGTGGCAGAAGCTACGAGTGCAGTTTAATGACTTC
TTCCACGCGAACTACCCGTACATAGCGCTCTACAGCGGACTGGGCGTGGC
AGTAACAGCCTACTTGCACTACCAATGGAGCGTGCACCACTACGACCTCA
TGTACTGGAAGCGTTTGGCGGAGGTCTTCTCGCAGGACATCGACTGCATC
CAGCTGGCTATACTGCTCTTGATCTTCGCGATCAACGCCATTTTCGTATT
CATCATCCTGAGCGTCTATCTGCGCCCAGCCCTCGACAATGGCAGTGAGA
TGTCCTTGCTGGAGATCAAGGATCGCTATGCCCGGTTCATACTGCTCCGC
CTGATAGCCCGTCTCGATCGCATACAGTCGAAGATCTCAGCGAAGCGTAA
GAGCCTCACCTTCCAGCACTATGTGAGGGCACACACGAACATGGTAAAGG
CGGTGGCCGTGTTCCGCAAGGATGCACGCAAGCTAATCCTGCCGAATGAG
AGCGAGATCCTGATGCCCATCGAGGACATCTACGGGGTGGCTGATGACGA
AGAACGACTGCTTCGGCGATCGGGCTACTACAAGCTGATCATCGACACCA
CCGACGAGACGGTCAAGTCTCTGTTCAACGCCAAGCTGGAGGAGATCCTG
TTCCCAACCAGCGCAAGCTTTCTAGACCAT
FMO07113.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6497-RB | 1561 | CG6497-RB | 115..768 | 9..662 | 3270 | 100 | Plus |
| CG6497-RA | 1206 | CG6497-RA | 115..768 | 9..662 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17253170..17253823 | 662..9 | 3270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:57 has no hits.
FMO07113.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:30 Download gff for
FMO07113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6497-RA | 111..768 | 1..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:39 Download gff for
FMO07113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6497-RA | 177..834 | 1..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:11 Download gff for
FMO07113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6497-RA | 111..768 | 1..662 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:11 Download gff for
FMO07113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17253170..17253827 | 1..662 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:30 Download gff for
FMO07113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17246270..17246927 | 1..662 | 99 | | Minus |
