FMO07114.5prime Sequence
832 bp (367 high quality bases) assembled on 2008-10-06
> FMO07114.5prime
CAATCCACATGGAACGCAGAGTTGAATTGATGTTGGAACCCATAGTGGCG
GGCAAGTTGGAGCGCAGATCGGATAACAGATCAAACAGGGTGGAGGATGA
GGAGCCCCATCTAACCAAGCAGCTCAAGAATCACTACGGGATTGAGGCAA
AAGTTCTGGGTCTCCTTGTCAAGTTAGATATGCGTTATAAGGAATACTAC
AATCTATACAAGTGCGAAATGAAGGCCCAAAAGATACTGGTTGAACGGAT
ATGGCTGCTAACCCAGCGATATCTGATTCTAATCAGTTCAGAGCAGATCT
GTCGCTATCCCAAAATGTACACCTTGTCCACCGAGGAGGCCATTATCACT
GAATATGAGGAAAAATTGGAAGTGCTGCCAGCTTCCAACTACAAAATGAA
AAACACCCTGTTGGAAATCAATCACCAGTGCAAGGAGTTCTATGCCGCCT
ACGAACGGCTGGACAAGGCACAGGATGCGCCTTTCATCATGGGCGATAGC
CATCATATAAGCATCCAGTACCACAAGATCATGGCCATCGACATATTCCA
CTATTTGTATGCAACAGTGCTGAAGCTCAAGTGCTTCATGCATCAGCTCG
ATCCCGTGAATCTGGAGAGTGTCGAGGAGTACCGCGATCTGCTCCTGACC
AAATCCGCCATGGAGGACTTTGAGGAGTATCTTAACAATCAATTTGTCTA
CTGCAAGTGTATCTACCCGATTCCAACCTGCCCCATCTTGAAGCTGAAGT
GTTCCCATCGAACATATCAATTTAAAGTATGTCAGTCGCCTCGCAAGCTT
TCTAGACATTCGTTTGGCGCGCGGGCCCGGTA
FMO07114.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31910-RA | 905 | CG31910-RA | 81..863 | 9..789 | 3370 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6745166..6745542 | 385..9 | 1720 | 97.1 | Minus |
| 2L | 23513712 | 2L | 6744705..6745105 | 789..391 | 1605 | 94.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:14:57 has no hits.
FMO07114.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:52 Download gff for
FMO07114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31910-RA | 73..875 | 1..798 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:40 Download gff for
FMO07114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31910-RA | 60..862 | 1..798 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:01 Download gff for
FMO07114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31910-RA | 73..875 | 1..798 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:01 Download gff for
FMO07114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6744693..6745107 | 389..798 | 93 | <- | Minus |
| 2L | 6745163..6745546 | 1..388 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:52 Download gff for
FMO07114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6744693..6745107 | 389..798 | 93 | <- | Minus |
| arm_2L | 6745163..6745546 | 1..388 | 95 | | Minus |
