FMO07115.5prime Sequence
777 bp (777 high quality bases) assembled on 2008-10-06
> FMO07115.5prime
CAGTCGACATGTCCCAGACAAATCCGAAACCAAGTGATACGCAATCACTG
CGCTGTTTGCACTGCATGAAGGTGATCCGTTGCTCCCGCTACGACACCAG
TGAACTGGTGCGACACATCCAACAGGATCATCCGGAGATATACGCAGTGA
CCACGGATAAAATCAAGAATCTGCACAAGCTGGCCGCGGATCACGGCATC
AGTGAGGAGCGGCTCTCGAAGATTAGCAAGATGACGGGTCTGTCCGAGTC
CCAGATGGCCGAAAAGGCAGAGAAATATATGGCCAAAAAGAAGAATTATG
GTCGCAGTGGTGGATCTGTCGCCGGTGACCCTGCTGCCGTCAGTGAAGCC
GCCTCCTACAAAACCGAGAAGCCCAGCTCCCCATGTCCATGTTCACGTCC
ATTGGAGAACTCGACGTCGCATCGGAGGAAATGCTATCGCGCCTCCATCG
AACGCTGGGCACCGGCGGAGGGGCGCATCTTTTGTCCGTGCTGCGCGACC
AGCAGGCGGCCGCTTATCAAGGCTGCCACTGAGATCTCGAACAACGGCTG
CTGTGCCGCCTGGGTGGTCTCCTGCTGGCCTCTGTGCTTCCTGCCCTGCC
TCATGTCCGCGGACAACAATGAGTACCTGTACTGCGCCAATTGCCGCGCC
TTTCTGGGCATCTACAATCGCGAGAAAAGCTGTGTGCAGCCCAGCAAGGA
GTTTTGTGTCCTGCAGCAAGTCGGTCACGGCCCCGCTCAAGTGTCCAACT
GAAAACCTGGCAAGCTTTCTAGACCAT
FMO07115.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15708-RA | 943 | CG15708-RA | 99..849 | 8..759 | 3735 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16241030..16241511 | 759..277 | 2365 | 99.8 | Minus |
| 2R | 25286936 | 2R | 16241568..16241836 | 276..8 | 1345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:28:11 has no hits.
FMO07115.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:12 Download gff for
FMO07115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15708-RA | 99..861 | 8..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:46:41 Download gff for
FMO07115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15708-RA | 99..861 | 8..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:31 Download gff for
FMO07115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15708-RA | 99..861 | 8..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:31 Download gff for
FMO07115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16241018..16241511 | 277..768 | 98 | <- | Minus |
| 2R | 16241568..16241836 | 8..276 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:12 Download gff for
FMO07115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12128523..12129016 | 277..768 | 98 | <- | Minus |
| arm_2R | 12129073..12129341 | 8..276 | 100 | | Minus |
