FMO07117.5prime Sequence
461 bp (461 high quality bases) assembled on 2008-10-06
> FMO07117.5prime
CAGTCGACATGTCCAGCTATAGAAGATTATTCCGGGCAAAGCGCCTAATG
AATTTGATGAAGGCTAATCGCGGAATGACCAGTACTGGCAAGCAACCGAT
TTTCGATGTGGAGACTAGAAAAGACTTTGAGCAACGTGTGATCAATAGCG
ATCGGCCGGTGGTTGTGGACTTTCATGCCAGCTGGTGCTGTCCATGCAAG
GCTCTGGCCCCTCGACTGGAGAACGTTGTGTCCGAGCAGGAAGGTCGAGT
GAGATTGGCCCGGGTCGATATTGATGAGCATGGGGAACTGGCCCTTGACT
ACAACGTGGGGTCCGTTCCTTCACTGGTGGTCATCAGCAACGGCAAGGTG
GTAAATCGAATGGTTGGCCTGCAGACCAGCGAATACCTACGCAAGTGGCT
CCATAAGGCGGTGCCACACCCACCACCTGAGGATACGGAAAACGCAAGCT
TTCTAGACCAT
FMO07117.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8517-RA | 732 | CG8517-RA | 99..533 | 9..443 | 2175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19714405..19714669 | 179..443 | 1325 | 100 | Plus |
| 2R | 25286936 | 2R | 19714174..19714346 | 9..181 | 865 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:34 has no hits.
FMO07117.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:05 Download gff for
FMO07117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8517-RA | 99..533 | 9..443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:49 Download gff for
FMO07117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8517-RA | 99..533 | 9..443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:10 Download gff for
FMO07117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8517-RA | 99..533 | 9..443 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:10 Download gff for
FMO07117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19714408..19714669 | 182..443 | 100 | | Plus |
| 2R | 19714174..19714346 | 9..181 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:05 Download gff for
FMO07117.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15601679..15601851 | 9..181 | 100 | -> | Plus |
| arm_2R | 15601913..15602174 | 182..443 | 100 | | Plus |
