FMO07119.5prime Sequence
476 bp (476 high quality bases) assembled on 2008-10-06
> FMO07119.5prime
CAGTCGACATGCTAATACAGGTTTTAGTGTTTTTTTTACTTTATCGAAAT
ACTTACGAAGATTGTAATCATAATCATTCGGCTGTCGAAGATCATTACGA
TTGTGGATGTTGTCCGGGCATAAGTAACAACAATGGCCAGGTGGTTGGGT
TCCATTGCCATAAAGATGACCAAAACTCAATTTTAAGATTTGCATCGGAT
GAGGAAAGTGCGTTTGCTGAATGTGTGCCAAACTGTTTTGAGATAAAATA
TCCCATTCAGGAATACTGCTGTTTCTGGTCACCGAAGCTGGGCTGTACGA
TACTAGTCAATGAAAAGTATTTCAGCAATAAAGACTTGTGCAATAACTGC
AAGTATTTTTGCCAAAGAACTACAGGAGATGGGAGGAGCTCTAGTTATCC
ACAGAAACTTATCTTGCTACTCTCATTACTGCTGATCGGTTGCAATTACT
TTCAGAACGCAAGCTTTCTAGACCAT
FMO07119.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32219-RA | 997 | CG32219-RA | 64..513 | 9..458 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19950507..19950715 | 458..250 | 1045 | 100 | Minus |
| 3L | 28110227 | 3L | 19950766..19950936 | 249..79 | 855 | 100 | Minus |
| 3L | 28110227 | 3L | 19951003..19951072 | 78..9 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:48:55 has no hits.
FMO07119.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:01 Download gff for
FMO07119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32219-RA | 62..520 | 6..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:52 Download gff for
FMO07119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32219-RA | 62..520 | 6..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:30:10 Download gff for
FMO07119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32219-RA | 62..520 | 6..466 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:30:10 Download gff for
FMO07119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19950500..19950715 | 250..466 | 98 | <- | Minus |
| 3L | 19950766..19950936 | 79..249 | 100 | <- | Minus |
| 3L | 19951003..19951074 | 6..78 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:01 Download gff for
FMO07119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19943600..19943815 | 250..466 | 98 | <- | Minus |
| arm_3L | 19943866..19944036 | 79..249 | 100 | <- | Minus |
| arm_3L | 19944103..19944174 | 6..78 | 98 | | Minus |
