FMO07120.5prime Sequence
950 bp (434 high quality bases) assembled on 2008-10-06
> FMO07120.5prime
CAATCCACATGTCCAAATACAATTCTAGCGCTGGGATCCGTCAGTTGGGT
ACTCGAAGTTCGGATGTGGATGCACTGGCACAGCGGGGCTACAATGTTGG
TCACAAGATCGGCGAGGGGTCTTATGCCACTGTTATAACCGCCGGTTATG
CCGATGATCATGGACATGGAGTACATTTGGCCTGTAAAATCATTGACAAA
GCCAAGGCGCCCACTGATTTCGTGAACAAGTTCTTTCCGCGCGAACTGGA
GATCCTGACAAAGATTGATCATTCCAACATTATTCATATCCATAGCATCC
TTCAACGCGGTCCCAAGATCTTCATCTTTATGCGTAACGCAAAGAATGGG
GATTTGTTGTCGCACATCAAGAGGTCGGGTCCCATCGATGAGAAGCAATC
GAAAATCTGGTTCTTTCAGATGTCCAAGGCACTGAAGTATCTGCACAACC
TGGACGTTGCCCATCGGGATCTCAAGTGCGAGAACATTCTTCTCTCCAAG
CGGCTCAACATCAAGCTGGCCGATTTCGGATTTGCTCGCTATTGTCGCGA
CGATAATGGCCGGGAGATGAAATCTGAGACATACTGCGGATCAGCTGCTT
ATGCTGCACCTGAAGTAGTTTGTGGACGACCATATGATCCAAAGCTAGCG
GACGCCTGGTCCTTGGGAGTCATTCTGTTCATCATGATGAATGCCAAGAT
GCCTTTCGATGACATTAACTTGACCAAATTGCTAGAGGATCAGCGTAGCC
GCAAGTTTGCCTTTCGCCGGAAGCTGCAGGAACGATATCGGCCCAGGCGA
AGGCACTGTTTCAGTGCTGCTCGAACCGGAGTACATGCTCGCTGGAATCT
ACGCAAGATCCTTACTGTGCATGGCTGCAACCGTCGAGGAATCCAAACAC
CATTCCCGCAGCTTTCTAGACCATTCATTGGCTCCCGGGCCCAGGTAAGT
FMO07120.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14305-RD | 1263 | CG14305-RD | 130..1036 | 8..907 | 4180 | 97.9 | Plus |
| CG14305-RC | 1407 | CG14305-RC | 274..1180 | 8..907 | 4180 | 97.9 | Plus |
| CG14305-RA | 1281 | CG14305-RA | 148..1054 | 8..907 | 4180 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18598964..18599855 | 8..894 | 4030 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:26:59 has no hits.
FMO07120.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:43 Download gff for
FMO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14305-RA | 141..1057 | 1..911 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:52 Download gff for
FMO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14305-RC | 151..1067 | 1..911 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:48 Download gff for
FMO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14305-RA | 141..1057 | 1..911 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:48 Download gff for
FMO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18598957..18599873 | 1..911 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:43 Download gff for
FMO07120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14424679..14425595 | 1..911 | 97 | | Plus |
