FMO07122.5prime Sequence
518 bp (518 high quality bases) assembled on 2008-10-06
> FMO07122.5prime
CAGTCGACATGGGCAAAAGATCGCAGAAGAGCAGTGTGCTAATGGTGTGT
GTGGGCAACCTATGCCGCTCCCCAATTGCCGAGGCTGTGATGCGTGACTT
GGTCGCAAGGGCGGGACTACAGGGGGAGTGGCATGTGGAGAGCGCCGGGA
TCGAGGATTGGCATTCCGGCCACCAACCAGATGAGCGTGCACTGAATGTC
CTGGCCAGGCACAACATCGAATACAATGGCAAGGCGAGAGTTCTAGCTCC
GGAGGACTTCCTCGAATTCGACTACATCTTCGCCATGGATCTGAGCAACC
TGGCCGCCCTGAGGCGCATGGCTCCCAAAGGCACCACTGCCAAGTTGCTG
ATTCTCGGGAATTTTGGCCTGAAACCAGATGAACGCATCATTGAGGATCC
CTATTATGACATTGGTGAAGCATCATTTGAAGAAATTTACCGGCAGTGCA
GCATAGCGTGTAGGAATTTTCTGAAACAAGCGCGCTTAAAACAGATAATG
GCAAGCTTTCTAGACCAT
FMO07122.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
primo-1-RA | 1336 | CG33748-RA | 146..637 | 9..500 | 2460 | 100 | Plus |
primo-2-RC | 1336 | CG33747-RC | 146..637 | 9..500 | 2460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13711218..13711572 | 408..54 | 1775 | 100 | Minus |
3R | 32079331 | 3R | 13710935..13711027 | 500..408 | 465 | 100 | Minus |
3R | 32079331 | 3R | 13711644..13711690 | 55..9 | 235 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:25:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 3833..3922 | 505..418 | 112 | 60 | Minus |
FMO07122.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:11 Download gff for
FMO07122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
primo-1-RA | 146..637 | 9..500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:37:00 Download gff for
FMO07122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
primo-2-RC | 146..637 | 9..500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:02 Download gff for
FMO07122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
primo-2-RC | 146..637 | 9..500 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:02 Download gff for
FMO07122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13710935..13711027 | 408..500 | 100 | <- | Minus |
3R | 13711219..13711571 | 55..407 | 100 | <- | Minus |
3R | 13711645..13711690 | 9..54 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:11 Download gff for
FMO07122.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9536657..9536749 | 408..500 | 100 | <- | Minus |
arm_3R | 9536941..9537293 | 55..407 | 100 | <- | Minus |
arm_3R | 9537367..9537412 | 9..54 | 100 | | Minus |