FMO07125.5prime Sequence
1210 bp (1025 high quality bases) assembled on 2008-10-06
> FMO07125.5prime
CAGTCGACATGGCCCAGTCGAATGCACACAATTTGGTCGAGTACAAGGCC
GGCCGCATGGTCCTTCTAGGCAAGATGGTCGAACCCGATGACCGCAAAGG
ACTGCTCTTTGTGCGCCGATCCGCCGATGATAATCAGCTCCATATCCACT
GGATGGATCGGCGTTCCGGGTCCGTTGAGCTGGATATTGTAGCAACGCCG
GGCGTCCTCGAGTTCCGTCGCATTGATCAGTGCAAAACCGGTCGGGTTTA
TGTCCTAAAGTATACACGATCGACGCAGCGTTACTTTTTCTGGATGCAGG
AGCTGCAGGCGGATGGGGATGCGTTATTTTGTCAGCGGGTCAATGAATTG
ATTGCCAGTGGTGAACGCCAAAGGGATGAGATTGCGGCGGCCGAGGGCGA
TATGGATACGGATGCGGATCATACAACAGCACGACGCGGTTTCGGTGGCA
GTGAGAATCCTCAAATTCTGGAAGAGATGCTGGTCGAAACGCAAGCAACT
TGGCTACCAGCTAACCGGAGTTTGAATCATTGGCAAACTGGTGATGCGAT
GGAAGAACCGCCCTTGCCATTTGCCGATCCCGATGCAAATACAGATACAG
ATACAGATACATATACATCAGAGTCGGGTATACAGACATTCGATTTGGCA
GCTGTTTTACGCCTACATGGCGCCGAAGCAGTGGACAAAGTTCTAAGTTG
CCCATCGAGACGTGAAAAACTAATGGCCCAATTGCCCAAAGATCATGAGC
GATGGATGAGCAGTCAGACATACTGGAGCATTTGCATTCGGCGCAAATTC
TACGAATCCTTGTCCTCTTTTTCCGTAGGACTTCATTCTGGTGCACTCAG
AAAAGAGTCTGGAGCCTCTATTGCAAAGTGATGACAATCCCGAGGCCTTG
ATGCAGCTCAGTTGGGGATGTTGAGCGTTTTCTACGTGAACTTGAACGAA
CGATGGGGATTATGGTGGGCAACCGATGCAGCTTTCTAGACCATTCGTTT
GGCGCGCGGTCCAGGTAGTGGTCATATCATAATCATAAATCTTAATCATA
TCACACTAGCCTAGGAGATCCTGTCATGACAGTGCTTGATCTCACACAAA
TAAAAAGGCCGGCGCACCGGACCGTTCTGAACAATCGAATGGATCTTAGG
TCATTACTGGAATCTACACAGGATCAGGCAGCTCGCATATCTCAATTAGC
GCGGAGCGTA
FMO07125.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpn13R-RA | 1088 | CG6789-RA | 59..1032 | 7..977 | 4660 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5131956..5132921 | 7..970 | 4495 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:54:08 has no hits.
FMO07125.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:31 Download gff for
FMO07125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn13R-RA | 51..1032 | 1..977 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:10 Download gff for
FMO07125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6789-RA | 51..1032 | 1..977 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:34 Download gff for
FMO07125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn13R-RA | 51..1032 | 1..977 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:34 Download gff for
FMO07125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5131948..5132929 | 1..977 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:31 Download gff for
FMO07125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5025981..5026962 | 1..977 | 98 | | Plus |
