FMO07126.5prime Sequence
515 bp (515 high quality bases) assembled on 2008-10-06
> FMO07126.5prime
CAGTCGACATGGCACATAAGCAGAGCACGAACAATGAGACATCCAATGGC
TCGACAACTGAAATAATTGACGAAACCGATGCCCGTGCTCAATTGGAATC
GGGCCGGACCACACCCACTCTTCTGTTGCGCCTCGAACATCCGCGTAATG
AACGCCGGGTGGCCTTTCACGCTGGGATCATCGACAACGAGCATTTGAAT
CGCAAGAAGTCCAAATGCTGCTGCATTTACAAAAAACCTCTCGCGTTCGG
CGAGAGCTCCTCTGAGGATGACGAAGACTGTGAGCACTGCTTTGGACATC
CGGAAAAGCGTCAGAGAAACGCAAAACACAATCACAATCACGGGGACAAA
CCATGCACGGAGGCGTCGCATCCGGAAGGACCTTCGACATCAACGCAGGC
CGCGCACATCAGTCAACCGCCAGCCGAGCCTGTTGAATCGAAGACCGATC
CAAAACCACCTACCCCAGGTGTTGACTTTGAGCAGACGGGCAGCTCGGCA
AGCTTTCTAGACCAT
FMO07126.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13994-RB | 589 | CG13994-RB | 35..523 | 9..497 | 2415 | 99.6 | Plus |
| CG13994-RA | 631 | CG13994-RA | 35..523 | 9..497 | 2415 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6063283..6063563 | 217..497 | 1405 | 100 | Plus |
| 2L | 23513712 | 2L | 6063023..6063231 | 9..217 | 1015 | 99 | Plus |
Blast to na_te.dros performed 2014-11-28 19:58:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3481..3541 | 297..237 | 125 | 67.2 | Minus |
FMO07126.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:21 Download gff for
FMO07126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13994-RA | 29..523 | 2..497 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:10 Download gff for
FMO07126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13994-RA | 1..494 | 6..497 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:02 Download gff for
FMO07126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13994-RA | 29..523 | 2..497 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:02 Download gff for
FMO07126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6063283..6063563 | 217..497 | 100 | | Plus |
| 2L | 6063017..6063230 | 2..216 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:21 Download gff for
FMO07126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6063283..6063563 | 217..497 | 100 | | Plus |
| arm_2L | 6063017..6063230 | 2..216 | 97 | -> | Plus |
