FMO07130.5prime Sequence
287 bp (287 high quality bases) assembled on 2008-10-06
> FMO07130.5prime
CAGTCGACATGCCCGAAGAAAAGTTCAAGTTTCCCATGCATGACTTACAC
TTGAAGCAAACGTTTCGCAATGTAAAAATGGCCTGCACTTTGGCCCTGTT
AGCTCCACTTCTTTTCTACACTTTACACAACAATCCGCGCAAGAGGAAGT
ACAGGAACTTTTACTCCACTTACGATCCCATGGATGCGTTCGACCGCATG
ATGAGTGGAGGATACCTATCGTCCTGTCCGCCGGGCAGTGGTCCCAAAAA
GGATGACAAGAAGAAGAAAGCAAGCTTTCTAGACCAT
FMO07130.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31644-RA | 480 | CG31644-RA | 59..319 | 9..269 | 1275 | 99.2 | Plus |
| CG31644-RC | 489 | CG31644-RC | 81..328 | 22..269 | 1210 | 99.2 | Plus |
| CG31644-RB | 474 | CG31644-RB | 71..313 | 27..269 | 1200 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5818051..5818298 | 269..22 | 1210 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:31:17 has no hits.
FMO07130.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:56 Download gff for
FMO07130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31644-RA | 50..319 | 1..269 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:12 Download gff for
FMO07130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31644-RA | 1..269 | 2..269 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:17 Download gff for
FMO07130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31644-RA | 50..319 | 1..269 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:17 Download gff for
FMO07130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5818048..5818296 | 24..274 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:56 Download gff for
FMO07130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5818048..5818296 | 24..274 | 98 | <- | Minus |
