FMO07131.5prime Sequence
266 bp (266 high quality bases) assembled on 2008-10-06
> FMO07131.5prime
CAGTCGACATGTCGTGCAATCGTTCTTTTGGACCTGGCCCTGGTGCCTAC
AATCTGCCCAGCACCTTTGGGTTTAAGAACTGCGACAAGAGGATGCAGCG
AAGTCCACAGTTCTCATTTGGCAGATCGTCGAGGGCGTGTAATAGTCCTA
GGATACCGCAGGGACCCGGCCCAGCAGATTATCATGTGGGCAAAATAACG
CGATATGGACGTCCTGCATCGGAGGACTTCAATGTTTATCGTCGTCGCGC
AAGCTTTCTAGACCAT
FMO07131.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31468-RB | 967 | CG31468-RB | 153..393 | 8..248 | 1205 | 100 | Plus |
| CG31468-RA | 447 | CG31468-RA | 153..393 | 8..248 | 1205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23699902..23700124 | 248..26 | 1100 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:46 has no hits.
FMO07131.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:39 Download gff for
FMO07131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31468-RA | 153..396 | 8..252 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:13 Download gff for
FMO07131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31468-RA | 153..396 | 8..252 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:39 Download gff for
FMO07131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31468-RA | 153..396 | 8..252 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:39 Download gff for
FMO07131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23699899..23700119 | 31..252 | 99 | <- | Minus |
| 3R | 23700180..23700202 | 8..30 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:39 Download gff for
FMO07131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19525621..19525841 | 31..252 | 99 | <- | Minus |
| arm_3R | 19525902..19525924 | 8..30 | 100 | | Minus |
