FMO07132.5prime Sequence
440 bp (440 high quality bases) assembled on 2008-10-06
> FMO07132.5prime
CAGTCGACATGTCAGACGCTGTGGACAAAATGTTGGCGGGAATGGCGGCC
AATCGGCAGACCATGAACCGCCAGCTGGCTAAGATAGACGAGATAATGGA
GCGGTCGAACAACACATTGCTCCACATCGAGTCCAACAGCAAGGCATTCA
GTCAGAATGTGGCTTTGTCGGAGACCCAGAAGATGTACAACCTCAGGCCG
GAGGCTGAGATGACCCTGTCCAAGATCCTGGAGAACTTCAAGCTGCTCAT
GTCTAGCAGTGACCAGCGGGAGGAGACATACAGCGCTCTGGAGGGCTGCC
TGGCCTACAGGCATCGCGTGGAGCACCTTGGCAGCTCCGTGCGTAAGCTG
GTGGCGCTCTACGACACCGTGGGCCAGATGAAGAACTCACAGGAAGAGCA
GTATGCCAGCGAGGATTCCCCCGCAAGCTTTCTAGACCAT
FMO07132.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
msd1-RA | 528 | CG13914-RA | 34..452 | 4..422 | 2080 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1331873..1332250 | 45..422 | 1890 | 100 | Plus |
3L | 28110227 | 3L | 1331777..1331818 | 4..45 | 195 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:54:15 has no hits.
FMO07132.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:33 Download gff for
FMO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
msd1-RA | 31..457 | 1..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:14 Download gff for
FMO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13914-RA | 46..472 | 1..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:38 Download gff for
FMO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
msd1-RA | 31..457 | 1..429 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:38 Download gff for
FMO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1331774..1331818 | 1..45 | 93 | -> | Plus |
3L | 1331874..1332255 | 46..429 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:33 Download gff for
FMO07132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1331774..1331818 | 1..45 | 93 | -> | Plus |
arm_3L | 1331874..1332255 | 46..429 | 99 | | Plus |