FMO07134.5prime Sequence
671 bp (671 high quality bases) assembled on 2008-10-06
> FMO07134.5prime
CAGTCGACATGCCAACCTTAAAGTTGCGTATCGGTCTGCCCTCGAAGCGA
ACGATGGGCAGCATATGCATCTGCGGAGCACTCGCCTCCATCTCGGGCCT
GGCCTACATGCGCTGGCGACTTGAGGACCGTGTACGCCAGACGGAGTTCT
ATCAGTTGGCCATCCAGCAGCTACGCCAGCACAGTGGAGCGGTCGGTCTG
CTGGGCGAGCCCATCAAGGAGTCGGGCTTTAATCTGTCCAACGAGAAGAA
TCGCTGTGACGAGGACAAGGCCCAGCTGCAGTTCCATGTCCAGGGTCCCA
AGGACAGGGGGACCGTCTATTTCTGGGCCTCAAACAACCAGAAACAGGGC
TGGCTGATCGATCGCCTGGAGCTCGAAACGAGACAGAACCCGAACACACG
CTACCTGCTTAAGAAGCCCCCGAACTACTCGCTGGTCAGCAGTGATGGTG
ATCCGGATCCCCCTAATGCCGAGTCCTCCGAGGAAACCCAGCAGCCGCAG
ACGCCGCTCGAGCCACAGGAGCAGATGGAAATGGAAGATAAGGAGCAGGA
GCCGACAGTCCATCAGCACCCCAGTATTCAGAACAATCCTCCGCAACAAC
TGCATCAGCAGCAGGGTCAGGAGCCAGTGCCTCACGTTCATACGGCGGAG
GGCGCAAGCTTTCTAGACCAT
FMO07134.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31913-RA | 863 | CG31913-RA | 89..734 | 8..653 | 3230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5784119..5784764 | 8..653 | 3230 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:33:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2340..2462 | 489..614 | 154 | 60.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2379..2507 | 489..614 | 133 | 59.2 | Plus |
FMO07134.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:38 Download gff for
FMO07134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31913-RA | 81..734 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:05 Download gff for
FMO07134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31913-RA | 81..734 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:22 Download gff for
FMO07134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31913-RA | 81..734 | 1..653 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:22 Download gff for
FMO07134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5784111..5784768 | 1..658 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:38 Download gff for
FMO07134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5784111..5784768 | 1..658 | 98 | -> | Plus |
