FMO07136.5prime Sequence
878 bp (878 high quality bases) assembled on 2008-10-06
> FMO07136.5prime
CAGTCGACATGCAGTCAGCACTGTGGATCTTTTGCAGACAAGGTTTCAGG
AGCTTTGCCACTAAAGCGCAAGGTTTCAGAAGCTTCGCCAGCAAAGTGAC
CTACCACGCGGATCCGCCATGCCAACCTGTCGACCCTTTGTGCCATCATG
TTCCAAGCGGCAGATGCGTGCAGGCCAGGGAAACGATCAATCTCAAACTG
CCACATGAGAGGTTATTGAAGCAAGAACGCGATCAGAAGAAGGAGAGGAA
ATGCTGTGTCCTGCGATCGGCGGCCAAAAATCCCTGCGTAGAGATAAGAC
GACCCAAAGCCGCAAAGCTGGAGGAGAAGCCATTCCGTTCGATGTGGGAG
CCACCTTGCAAGGCGAACGAGCAGCCGTTCTGCAAGGAAATGCTGCCCCG
CTTCGATGCGATGTACTACCATCCCTCAAACAAGTGCCGCTGCTACCAAC
GCACCTGGGTGGAGTGTTCACCCGTTAAGAAACGGCTGAAGAAGGTTTGC
TGCCTGGACGCCATCGAACCTCCTGAGATTCTGTACCGGATCAGGCCGCC
CTGCCCAGGAACTTGCCAAATCAACTATAAGGCTCGAAGGCTACTCTGTG
CGGATGGAGAATGGGAGCGGGACCCAACGAGGAAGTGTCCGAAATTCTTT
CACCCCTGTTGCAAGCTGGCTCGCTGCAATCCTCGTTGCTCCAGAGGCAG
AAAGCCTACCCTATGCACCAAGTTGCGAGCTCCATATCCTTGTTACTCAG
AAAAAATAAGAGGAACAAGACCGCTCCGAAAAAGAGAGTGCCTTTGCTTG
GAGACCACCCCGAAATGTATAGCTCTTGCGGAAAGAATGAGACGCGATGG
ATTAAATCTGGCAAGCTTTCTAGACCAT
FMO07136.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| swif-RB | 2074 | CG30366-RB | 1000..1852 | 8..860 | 4265 | 100 | Plus |
| swif-RA | 1015 | CG30366-RA | 43..895 | 8..860 | 4265 | 100 | Plus |
| cola-RA | 2074 | CG30363-RA | 1000..1852 | 8..860 | 4265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8363494..8364346 | 860..8 | 4265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:27 has no hits.
FMO07136.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:34 Download gff for
FMO07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| swif-RA | 43..895 | 8..860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:09 Download gff for
FMO07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30366-RB | 1000..1852 | 8..860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:29 Download gff for
FMO07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cola-RA | 1000..1852 | 8..860 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:29 Download gff for
FMO07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8363494..8364346 | 8..860 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:34 Download gff for
FMO07136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4250999..4251851 | 8..860 | 100 | | Minus |
