FMO07137.5prime Sequence
620 bp (620 high quality bases) assembled on 2008-10-06
> FMO07137.5prime
CAGTCGACATGGCAATTACGCGGCGGCTTCCCTGGCCGAAGCTGCTGTTT
TTGTTTGTCTGGCTGTGTCTGTCATTGGATACAAATCGTGCAGCTCGAGT
GCCCAGCGATCAGTTTGTGTTTCCCTCGGAGTCCAAGCCAAATGCCACAG
CCATCCGACTGGAATCCAGACTTAAGGAAATCGAGCGAGAAATGGCGGAG
GTGACTAGAGCCACAAATGTAAATCTACCAATCCTCAAAGAAATCAAAAA
GGGCACACCGAGAACTACGGCTAACGACAACAAGCATGAGTCACCGGCAA
ATACTACCAATGATTCGAAAAACTTGACCGAACCACAGGGAAACTCATCA
ACACAAGAGATTAAAATGAACGATGTGCCCAGCATTTCGAAAAATCATGC
ACATCCTTCCAGCGAGTCCAAGATGATAACCTTCGGCCAGGAATCTAGTT
CAGATAAGCCAGCGCCTTGGGATCATACGGAAGCCACCAATGCTAGCAGT
GCCACTAGTGTGGTTATTGGGCCAAGGATTGTCCTGGAAACAACGCGAAT
TTGTCCACAGGGCACTACTCTGACCGTAAATGATCATTGCCGAAAAATTG
CCGCAAGCTTTCTAGACCAT
FMO07137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11400-RB | 1217 | CG11400-RB | 80..673 | 9..602 | 2970 | 100 | Plus |
| CG11400-RA | 724 | CG11400-RA | 80..673 | 9..602 | 2970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17134208..17134801 | 9..602 | 2970 | 100 | Plus |
| 2R | 25286936 | 2R | 17135811..17135935 | 9..133 | 505 | 93.6 | Plus |
| 2R | 25286936 | 2R | 17135937..17136068 | 471..602 | 375 | 85.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:54:22 has no hits.
FMO07137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:36 Download gff for
FMO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11400-RA | 80..679 | 9..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:28 Download gff for
FMO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11400-RA | 52..651 | 9..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:42 Download gff for
FMO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11400-RA | 80..679 | 9..610 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:42 Download gff for
FMO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17134208..17134807 | 9..610 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:36 Download gff for
FMO07137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13021713..13022312 | 9..610 | 99 | | Plus |
