FMO07138.5prime Sequence
964 bp (935 high quality bases) assembled on 2008-10-06
> FMO07138.5prime
CAGTCGACATGCGTGTGGGCCAGCTGCTCCGCTTCCGGAGCACCAGCTTG
CGCAGCTCCACCGCCAGGCAGGAGTACGTGCCGCATCACAAGCCCGTCGT
GGAGGACGACATCAAACGGCTGGAGGACTTTCTCCTGTCCAAACCGAATG
TTTTGGTTCTCACGGGCGCTGGCATCTCGACGGAATCGGGGATTCCCGAT
TACCGTTCCGAAGGCGTGGGCCTCTACGCCCGCTCCAACCACAAGCCCGT
CCAGCACATGGAGTTCGTCAAGTCGTCGGCGGTGCGCAAGCGGTACTGGG
CCAGGAACTTTGTGGGCTGGCCCAAGTTTTCTGCCACACAGCCCAATGCC
ACGCATCACGCGCTGGCCAGATTCGAGCGGGAGGAGCGGGTCCAGGCGGT
GGTCACCCAGAACGTGGACCGGCTGCACACGAAGGCGGGCAGCCGAAATG
TTGTGGAGGTTCATGGCAGTGGCTATGTGGTCAAGTGCCTGTCATGCGAG
TACCGGATCGATCGTCACGAGTTCCAGAGCATACTGGCGTCGCTAAATCC
GGCCTTCAAAGATGCCCCCGACATGATCCGGCCCGATGGCGATGTAGAGA
TACCGCTGGAGTACATCGAGAACTTCCGGATACCCGAGTGTACGCAGTGC
GGCGGCGACTTGAAAGCCGGAAATTGTCTTCTTCGGAGATTCTGTGCCTC
GGCCACGAGTGGATCAGATTGCCGGCATGGTGTACAATAGCGATGGCCTG
CTTGTCCTCGGGTCCAGTCTCCTGGTCTTCTCCGGCTACCGCGTTGTCCT
GCAGACCAAGGACCTCAAGCTACCGGTGGGCATTGTTAATATTGGCCGAA
ACGCGCGCCGATCACCTGGCGGATATCAAGATATCCGCCAGGTGCGGCGA
TGTCATACCCGAACTGTTCGACTATCGCATTCGAAAAGCGGTTAGTGCAA
GCTTTCTAGACCAT
FMO07138.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sirt4-RC | 1112 | CG3187-RC | 73..1003 | 9..940 | 4545 | 99.4 | Plus |
| Sirt4-RB | 1253 | CG3187-RB | 394..1144 | 189..940 | 3645 | 99.2 | Plus |
| Sirt4-RA | 1198 | CG3187-RA | 340..1089 | 190..940 | 3640 | 99.2 | Plus |
| Sirt4-RB | 1253 | CG3187-RB | 73..253 | 9..189 | 905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5664737..5665487 | 940..189 | 3570 | 99.2 | Minus |
| X | 23542271 | X | 5665687..5665868 | 190..9 | 910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:31:26 has no hits.
FMO07138.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:00 Download gff for
FMO07138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt4-RC | 73..1011 | 9..950 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:29 Download gff for
FMO07138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt4-RC | 102..1040 | 9..950 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:22 Download gff for
FMO07138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt4-RC | 73..1011 | 9..950 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:22 Download gff for
FMO07138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5664729..5665486 | 190..950 | 98 | <- | Minus |
| X | 5665688..5665868 | 9..189 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:00 Download gff for
FMO07138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5558762..5559519 | 190..950 | 98 | <- | Minus |
| arm_X | 5559721..5559901 | 9..189 | 100 | | Minus |
