FMO07147.5prime Sequence
1042 bp (952 high quality bases) assembled on 2008-10-06
> FMO07147.5prime
CAGTCGACATGCTCTGCTGGGCCAACGAGGATCACTATCTGAGCCAACGC
TACCCGAATCCGCAGCAAAAGGCGCCAGAAACGCTTAAGAACCTGCTGTT
GCGATCCAGTGTACCGATAGTGGGTGCTCCGAATCCCGAGAAGGACTCGC
ATTTCGCCGGCACCATGGCACCGCTCAAGGGTCAGGAGGTGCTTAAGTTC
CACAAGCACTCCTACCTCGAGAACCGCATCTTCGATCACCGCCTGGTCAA
GGACAACCTGCTGGACAAGTGGCCCACCGCTGACATGAACGAGTACAACG
AGCGCAAGGACCACCGCAACCTCATGGAGTCCTATCCATGGAGCCAGGCG
GGCGCTCCGCCCTGCATGGAGCCCGTCATGGGGCCTTCGATCCCGCCGAG
AGTTGGCGCCGCCTACGAGACGCCCACGAAGCACCCGTGGCGCCCTGCTA
TGGCCTATGAGCTAATCCAGGTGAAGCATATGCCCGAGCAGCCGGTGACC
AACCAGCTGACCAAGCAGTGCTTCCTGCCCAAGGGCATGAAGACGGACGG
CATGATATTCCCCAACTTGGTCACCGGGTTCGATCGCAATCCACAGCACG
CCGCCCGGGCTGCCCTCTACACGCGGTACACCAGCAACGAGTGGTACAAC
AACAACATGACCAAGTACTCCGAGTCGAAACATGAATCGCAACCTCTCGG
AGCGCATGCGGAATGACGCATTGCGTCTGATGCGGGAGACTGACGAGAAG
GCCACCTCGGGCCAGAGGGACGCCGGCCGAAGGCTGGGCGAGCGCATCAC
CGACCTGACCTTCTGGCGCAACGAGCTGAACGCGGAGCTGGAAAAGCTGA
TCGCCGAGATGTCAGACATCAACGAGCTGCAGCGGCAGTGCGGGCAAGGC
ACTTCTCGACCTGGAGATACACTGCACATCGCCAGGAGTGCTCTTTCACC
GAAGTCCCGCCAGGCACGGAGAAGGTGCATGACATCGTGAGAAGGCCTCC
TCATTGAAATCAACACTTGAGGAACTTCCGTGACCGGCTTAG
FMO07147.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32820-RA | 2418 | CG32820-RA | 290..1326 | 9..1039 | 4825 | 98.3 | Plus |
| CG32819-RA | 2191 | CG32819-RA | 63..1099 | 9..1039 | 4825 | 98.3 | Plus |
| CG17450-RB | 1995 | CG17450-RB | 63..1099 | 9..1039 | 4810 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21607516..21607859 | 679..336 | 1720 | 100 | Minus |
| X | 23542271 | X | 21613608..21613951 | 679..336 | 1720 | 100 | Minus |
| X | 23542271 | X | 21619700..21620043 | 679..336 | 1720 | 100 | Minus |
| X | 23542271 | X | 21614624..21614950 | 335..9 | 1635 | 100 | Minus |
| X | 23542271 | X | 21620716..21621042 | 335..9 | 1635 | 100 | Minus |
| X | 23542271 | X | 21608532..21608858 | 335..9 | 1620 | 99.7 | Minus |
| X | 23542271 | X | 21607027..21607384 | 1039..689 | 1225 | 95.3 | Minus |
| X | 23542271 | X | 21613119..21613476 | 1039..689 | 1225 | 95.3 | Minus |
| X | 23542271 | X | 21619211..21619568 | 1039..689 | 1225 | 95.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:31:20 has no hits.
FMO07147.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:58 Download gff for
FMO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32820-RA | 53..1101 | 1..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:26 Download gff for
FMO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32820-RA | 53..1101 | 1..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:19 Download gff for
FMO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32819-RA | 53..1101 | 1..1042 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:19 Download gff for
FMO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21613599..21613951 | 336..689 | 99 | <- | Minus |
| X | 21614624..21614959 | 1..335 | 99 | | Minus |
| X | 21613117..21613475 | 690..1042 | 95 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:58 Download gff for
FMO07147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21484144..21484502 | 690..1042 | 95 | <- | Minus |
| arm_X | 21484626..21484978 | 336..689 | 99 | <- | Minus |
| arm_X | 21485651..21485986 | 1..335 | 99 | | Minus |
