FMO07152.5prime Sequence
530 bp (530 high quality bases) assembled on 2008-10-06
> FMO07152.5prime
CAGTCGACATGTTCAAAAACCACTTGGAAATGATTGGGCGCAATGAGAGC
CCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCCCTGAAGGG
CTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTACA
GCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACGAGCCCGCC
ACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTGCCAGTGAG
CCGCGACACCTACGGCTACTCGCCCCGTGCCATCTACGATCATCACTACA
GCCGAACAATTCCAGCTAACTACGACGCAGAGAAGGCCTGGAATGATCAT
CTGAAGCGCATGCAGGAGATCGAGCGCAGGTACCCATCTCGCTATGGTCT
CTACTTGAGGGACAAGCCACTCACGCCCAACTCGCTGGTGCCCCTGGAGT
ACGAGCCAGAGGACAAGCTGCTGGCTGAGCTCAACAAGGGTAAGGATATC
AAAGACATTTTCGCAAGCTTTCTAGACCAT
FMO07152.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mf-RQ | 1440 | CG6803-RQ | 115..618 | 9..512 | 2520 | 100 | Plus |
| Mf-RC | 824 | CG6803-RC | 115..618 | 9..512 | 2520 | 100 | Plus |
| Mf-RM | 1939 | CG553-RM | 115..595 | 9..489 | 2405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15178280..15178490 | 309..99 | 1055 | 100 | Minus |
| 3R | 32079331 | 3R | 15176161..15176295 | 512..378 | 675 | 100 | Minus |
| 3R | 32079331 | 3R | 15179038..15179129 | 100..9 | 460 | 100 | Minus |
| 3R | 32079331 | 3R | 15176362..15176437 | 381..306 | 365 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:51 has no hits.
FMO07152.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:55 Download gff for
FMO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mf-RC | 107..621 | 1..516 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:41:54 Download gff for
FMO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mf-RC | 107..621 | 1..516 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:51 Download gff for
FMO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mf-RC | 107..621 | 1..516 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:51 Download gff for
FMO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15179039..15179135 | 1..99 | 95 | | Minus |
| 3R | 15176157..15176293 | 380..516 | 98 | <- | Minus |
| 3R | 15176364..15176433 | 310..379 | 100 | <- | Minus |
| 3R | 15178280..15178489 | 100..309 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:55 Download gff for
FMO07152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11001879..11002015 | 380..516 | 98 | <- | Minus |
| arm_3R | 11002086..11002155 | 310..379 | 100 | <- | Minus |
| arm_3R | 11004002..11004211 | 100..309 | 100 | <- | Minus |
| arm_3R | 11004761..11004857 | 1..99 | 95 | | Minus |
