FMO07164.5prime Sequence
933 bp (933 high quality bases) assembled on 2008-10-06
> FMO07164.5prime
CTATACGAAGTTATCAGTCGACATGGCAGAATACAACATGAGCCACATGG
TGCGACCCCAGGGATTCAGTTTGGAAGAGCTGCGTCAGACTATGAGTCGA
TCGGCGATTCGGGAACAATGCTACTTTATTTATGCCACCGGCAATATTCT
GGAGATTATATCTGGTTTTGATGAACTGCTCAACCAGGAGGGGATCCAAT
TCGGAGCAGATAAACTGGCTGCGGTGTATGTATGCGGTTTGATGGTTTAT
CTACTCCATCATGAGGACACGTCGGCCACCCAGGTGAAAAGAACTCTTTT
CCTGCAAAAGTGCTTCAATTATATGGCATGCTCCGAGGAAAGCCATATCC
ACCAGGTATGCGTCCATGTCCTGGGTCTCTTGGATATCCAGAGTTCGAGC
ACAATGCTCAACCTGATCCTCGGCTGCCGCGTGGCCAGTCCGCTGTGCAC
AATGGCCAGCGTTGTGGCTAACTGTCTGCTCTGGGCCATGTTGGATCATA
TGTCGGACTTGGGCCTGGACTTGCACCGATTGCGTCCGGCTAACACACTG
CTGCTCGTCGTTGCCGTGGTGAAGCCGCATATTTATGTAATATCCTATTT
GCATTCCCTGCACCTGGTGGTCCGTTTGATATCCAGCATCCTGCTGATCG
GACCATTCAATGCCCAGGGCCAGCAACTGTGCCAGGAGACCGATGTGCCG
GAGGATTATATGAAACTGGCCAGGGACGATTGTTCGATATTAGTTCGCTG
GCTAATCGCGATCGTTGATGAGCTGCGTCCGCTGATGGTGGAGAACAACG
ATTTGGGGCATCTGCATGAGCGCCTGGTGCTTTTGGAGTCCATATGTGAG
CTTATGCAGCTCTTGCATGGCCATTTGGTTAAGTGTTACCAAGGCAAAAG
TGGACCACAATGTAAGGCAGCTTTCTAGACCAT
FMO07164.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15728-RB | 1250 | CG15728-RB | 158..1051 | 23..916 | 4470 | 100 | Plus |
| CG15728-RA | 1140 | CG15728-RA | 70..963 | 23..916 | 4470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12627677..12628246 | 347..916 | 2850 | 100 | Plus |
| X | 23542271 | X | 12627419..12627612 | 153..346 | 970 | 100 | Plus |
| X | 23542271 | X | 12627233..12627364 | 23..154 | 660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:59:08 has no hits.
FMO07164.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:36 Download gff for
FMO07164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15728-RA | 61..963 | 14..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:42:14 Download gff for
FMO07164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15728-RA | 1..897 | 23..919 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:13 Download gff for
FMO07164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15728-RA | 61..963 | 14..916 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:13 Download gff for
FMO07164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12627224..12627364 | 14..154 | 97 | -> | Plus |
| X | 12627421..12627612 | 155..346 | 100 | -> | Plus |
| X | 12627677..12628246 | 347..916 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:36 Download gff for
FMO07164.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12521257..12521397 | 14..154 | 97 | -> | Plus |
| arm_X | 12521454..12521645 | 155..346 | 100 | -> | Plus |
| arm_X | 12521710..12522279 | 347..916 | 100 | | Plus |
