FMO07165.5prime Sequence
986 bp (986 high quality bases) assembled on 2008-10-06
> FMO07165.5prime
CAGTCGACATGTCACCGCAAATCCGTCCACTTACGCCAGAGCTGCAAAAA
GTTGCCAAGGAGCAGCTCAAGGAGGATCCCGAACGTCTCGAAGCCGATCT
GCAGGCGTTTAAGACATGGATCGAGCAGCAGCCGCATCTAAATCCCCGAA
TGGATGATCAGTTTCTGGTGGCTTTCTTGCGCGGCTGCAAGTACAGTTTG
GAGCGGGCCAAGTCCAAGTTAGATAAGTACTACACGCTGAAGACCAAGTA
TCCGGACTATTTCCGAGTTACCAACACCACGGATAGCAAGTTCCGGGAGA
TTCATCAAACGGGTGCCATCATCTACCTGCCCACTCCGCTGAATGAAAAT
GGACCTCGCATCGGGATCTGGCGCATGGGATTGGTGCCAGTGGAGAAGTA
CACAATGCTGGAGTGCATGCAAGTGGCCCAGGCAATGCAGGAGATTGCCA
TTTTGGAGGACGACTACGCCAATGTCAATGGAGTAGTTTTCATTATGGAC
ATGAAGGGTGCCACCGCCGCACACTTGTTCCAGATGACGCCGTCGATGGC
CAAGAAATTCACTGTCTTCTCGGAGGAGGCACTTCCACTGCGTCTGAAGG
CACAGCATTTCATCAACACCATCACCGGATTCGAGCAGCTGTTCAACATG
TTCAAGCCAATGATGTCCAAGAAAAATGCAGTCTCGCCTATTTGTGCACG
GCAACAAAATGGGGCTCTTGACGGAGCAGATTCCACTGAAATATCTGCCC
GAGGAATACGGCGGCGAGAATGGCACCACGCAGGACATCGTGGCCGCCAT
GGAGAAGAAGTGGGACGAGTACGCCGATTTCTTCCAGGAAATGTGAACTT
CGGCACCGACGAGAGCCTGCGTCCCGGAAAACCATCGATTTTGAGGGGCT
TTTCGGAGTAGAATGTTCCTTTAGAAAGCTCACGTGACGCAGCTTTCTAG
ACCATTCGTTTGCGCGCGGGCCCAGGTAAGTGGTCA
FMO07165.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33514-RA | 1179 | CG33514-RA | 63..987 | 9..932 | 4525 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4365859..4366479 | 313..932 | 2930 | 99.2 | Plus |
| 3L | 28110227 | 3L | 4365496..4365800 | 9..313 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:40:33 has no hits.
FMO07165.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:56 Download gff for
FMO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33514-RA | 56..1002 | 1..947 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:42:16 Download gff for
FMO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33514-RA | 1..940 | 9..947 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:13 Download gff for
FMO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33514-RA | 56..1002 | 1..947 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:13 Download gff for
FMO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4365489..4365800 | 1..313 | 98 | -> | Plus |
| 3L | 4365860..4366494 | 314..947 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:56 Download gff for
FMO07165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4365489..4365800 | 1..313 | 98 | -> | Plus |
| arm_3L | 4365860..4366494 | 314..947 | 98 | | Plus |
