FMO07166.5prime Sequence
824 bp (824 high quality bases) assembled on 2008-10-06
> FMO07166.5prime
CAGTCGACATGCAGAAAATGAATTTACATGTGTGCGCCTTAGCGCTGCTG
CTGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTGGACCTGGTAGA
CGATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGAGGAGAAGCCAC
GCAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCAAGACGCCGCCG
ACGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATCGTTTGCGAGAT
GATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCACCTGCCCC
GCTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCGAAGAGGCGCCC
AGTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGACCACGTGCTGAG
CGAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTCCAAGACCATCT
ATGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGACGCCGGAG
AAGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTACACCGAGAAGAC
GCATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTGCCGCGTGCACG
CCCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGAACAAGGAGATC
GTCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGATCTTCTGATCTC
CGAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCATAGCCCGCAACG
TCGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCGTACTTAATGAG
GAAGACGCAAGCTTTCTAGACCAT
FMO07166.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RA | 1167 | CG15009-RA | 240..1037 | 9..806 | 3990 | 100 | Plus |
| ImpL2-RD | 2355 | CG15009-RD | 729..1521 | 14..806 | 3965 | 100 | Plus |
| ImpL2-RC | 989 | CG15009-RC | 67..859 | 14..806 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225711 | 794..10 | 3925 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:27:25 has no hits.
FMO07166.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:52 Download gff for
FMO07166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 9..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:42:17 Download gff for
FMO07166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 9..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:02 Download gff for
FMO07166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 9..818 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:02 Download gff for
FMO07166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224927..4225719 | 1..794 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:52 Download gff for
FMO07166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224927..4225719 | 1..794 | 99 | | Minus |
