FMO07168.5prime Sequence
1241 bp (979 high quality bases) assembled on 2008-10-06
> FMO07168.5prime
CAGTCGACATGGCATTTACCAGCAGCTCATCGCCCGCTTGGGATTATCGA
AGCTCCCCGGAAGCGTTGGGTGTCGTCCCGTTCCTGTGGCAGCACCAGAA
CGCCACGGAAACGCCAACGGAAATAACCCTCCAGGCGACCAGTTTCGGTG
CCGGCCATCTGCTGTGGCTAGCCATCAATGCCTTCTTGTTTGTCCTTATC
CTGGGCGGCAATATTCTGACCATTGTGGCGGTGCGCACCTGCCGCCACCT
GCGATCGGTCATCTCCAATCTGTTCATCCTGTCGCTGGCCGTCTCCGACT
TCTGTGTGGGACTGGCACTGCCCTATCATCTGGTATTTTACATGGGCTCG
GACATTGGCGCCATGAGAGGTCCCTGCCTGCTGCGCTTCTTCCTGCTCAT
CTGCGCCTGCTGCGTGTCCATGTTGACTCTGATCTCGATTGCGGTGGATC
GGTATATAGCAGTCGTCTATGCTCTGCACTATAGAAGATACATGACCCGT
CGAGTGGCATATAGCATCATCATATTCAATTGGTGCTTGGGTGCATTGGT
GGCTCTGCTGCCAGTGTTCTGGAATCGATGGCCGGATGCACAGGCGTGCG
AATTCGACGAAGTTCTCGCGCCTGGTTACATTGCCGGAGTGATAACGCCG
GGTTTTGTGATCATCTGGATCTGTATGTTCCTCGTCTACTGGCGCATCAT
GCGCGAGGCATCCAAGCAGGCGCTGCGATTGCGACAGTCGGTGGTCTACA
ACACGGACGAGGCCACCACCATGCGAAATCTGCTGCTCCATCCAGACTGG
AAGAGCGTCCAGATTGTGGTCTTTCATCATGGGCTGCTTCACGCTCTGTT
GGCTACGTACTTCTGTGTGGCCATTGCCCAGCTATTTAGCATCTGCCAGA
GCAGCTCGATGATCTACAGACGACGTTCCTCTCTGGCCATTGCCCACTCT
GCTCTCAATCCGATTATCTACTCGTGGAGACCTCTGGCTTTCGGCGAGCC
TTTGTCCAACATTATGCTGCCGAACGGGCAAGCAGTGCGAGGATCATTGC
CCGGCGACAGCAGCCCCGCATGGAGGCACCTCCCTCATCCTCAGGAATCA
ACCGAGGCCACTCAGGCAAGCTTTAGACTTTCGTGGGCGCGGGGCCGAGA
ATGGGTCATACCTATCTATCTAATCATACCAACATGCCTGAGAATCCTGA
CATGAACGAGTGTCTGTGAACTTCTCACCAAATAAAAGCGC
FMO07168.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12796-RA | 1218 | CG12796-RA | 23..1136 | 8..1115 | 5090 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6831542..6832114 | 1056..486 | 2455 | 97.6 | Minus |
| X | 23542271 | X | 6832183..6832662 | 487..8 | 2400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:49:19 has no hits.
FMO07168.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:21 Download gff for
FMO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12796-RA | 16..1120 | 1..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:42:30 Download gff for
FMO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12796-RA | 1..1097 | 9..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:30:24 Download gff for
FMO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12796-RA | 16..1120 | 1..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:30:24 Download gff for
FMO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6831495..6832112 | 488..1101 | 96 | <- | Minus |
| X | 6832183..6832669 | 1..487 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:21 Download gff for
FMO07168.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6725528..6726145 | 488..1101 | 96 | <- | Minus |
| arm_X | 6726216..6726702 | 1..487 | 99 | | Minus |
