Clone FMO07181 Report

Search the DGRC for FMO07181

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:71
Well:81
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG8360-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07181.5prime Sequence

500 bp (500 high quality bases) assembled on 2008-10-06

> FMO07181.5prime
CAGTCGACATGACACAGGTGTTTATCAATGGTGCCAGAGACGATCTCAAT
GTACGGGAATTCCAGAGCCTGGATCCTTCGATTCAAGAGATCATCCTGGC
AGCCACGGAAGCCAGAAAACAGGCTTATTGTCCGTACAGTAACTTTGCCG
TAGGAGCCGCCCTGAGGACCAGCGATGGCACCATATACTCCGGTTGCAAC
ATCGAAAACGGGGCGTATGCCACCTGCATTTGTGCAGAGCGCACTGCAGC
CGTCAAGGCCATCAGTGAAGGCAAACGCGACTTTGTGGCTTGTGCAGTGG
TGGCCCAGCAGGATAATGGCTTCACCACGCCTTGTGGCGTCTGCCGGCAG
TTCCTCTCGGAGTTCGTCAACGGCAAGGACATCCCCCTGTACGCCGCCAA
GCCGACCAATCTTCCATTGAGGGTGCTCTGCACCAGCGTTCTCCAACTGC
TGCCCAACGGCTTTAGCTTCGCCAACGGAAAAGCAAGCTTTCTAGACCAT

FMO07181.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8360-RC 787 CG8360-RC 175..649 8..482 2375 100 Plus
CG8360-RA 714 CG8360-RA 102..576 8..482 2375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8213778..8213997 263..482 1100 100 Plus
2L 23513712 2L 8213336..8213529 72..265 970 100 Plus
2L 23513712 2L 8213218..8213282 8..72 325 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:38:58 has no hits.

FMO07181.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:34 Download gff for FMO07181.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 96..576 1..482 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:42:53 Download gff for FMO07181.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 34..514 1..482 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:43 Download gff for FMO07181.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8360-RA 96..576 1..482 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:43 Download gff for FMO07181.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8213212..8213282 1..72 94 -> Plus
2L 8213337..8213529 73..265 100 -> Plus
2L 8213781..8213997 266..482 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:34 Download gff for FMO07181.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8213212..8213282 1..72 94 -> Plus
arm_2L 8213337..8213529 73..265 100 -> Plus
arm_2L 8213781..8213997 266..482 100   Plus