FMO07196.5prime Sequence
759 bp (759 high quality bases) assembled on 2008-10-06
> FMO07196.5prime
CAGTCGACATGAGTTCCCCTCGTGCGGTTCTAGTCAGCCTGTTCCTGATC
TGCAGTCAGGCACTAGCTGACCTTTCTGGTGATGCCCAGACTCTGGAAAA
GTGCCTGCGGCAACTTAGTTCGCCGGAGAGCATTGCTGGCGATCTTCGAA
AGCTGGAACGGTATTCATCTTGGACGCGGGAGGAGGTACCTTGCCTGATG
CGCTGCTTGGCCAGAGAAAAGGGCTGGTTCGACGTGGAGGAAAACAAGTG
GAGGCTCAAGCAACTGACTGAGGACCTGGGCGCCGATGTCTATAACTACT
GCAGATTCGAGCTGCGCCGGATGGGGTCCGATGGCTGCAGCTTCGCCTAT
CGGGGACTCAGGTGCCTGAAGCAGGCCGAGATGCATGCGGGCACCAGCCT
GAGCACACTGCTACAGTGTTCCCGCCAGCTGAACGCCACCAACGTGGAGC
TGCTGCAGTACAGTAAGCTGAAGTCAAAGGAACCTATTCCCTGCCTCTTT
CAGTGCTTTGCGGATGCCATGGGATTCTACGATCCCGATGGAAACTGGCG
GCTGGAAAACTGGAAGCAGGCGTTTGGGCCTTCCGGAAATGAGGATCAGT
CTTCTGGCGCTGACTACAGTGGCTGTCGACTAAGTGGGACTCAGCGGGAG
GTGGCGCTAAGCAAGTGCTCGTGGATGTACCATGAGTACAAATGCTGGGA
GCGAGTAAATGGGAATAAGCTAGTGGAGGACAACGAAGAGCAGCAGCTTT
CTAGACCAT
FMO07196.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp83ef-RA | 901 | CG31557-RA | 27..761 | 9..743 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6109782..6110468 | 743..57 | 3435 | 100 | Minus |
| 3R | 32079331 | 3R | 6110957..6111008 | 60..9 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:28 has no hits.
FMO07196.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:37 Download gff for
FMO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp83ef-RA | 20..769 | 1..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:42:55 Download gff for
FMO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp83ef-RA | 4..753 | 1..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:45 Download gff for
FMO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp83ef-RA | 20..769 | 1..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:45 Download gff for
FMO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6109774..6110465 | 60..753 | 99 | <- | Minus |
| 3R | 6110958..6111015 | 1..59 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:37 Download gff for
FMO07196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1935496..1936187 | 60..753 | 99 | <- | Minus |
| arm_3R | 1936680..1936737 | 1..59 | 94 | | Minus |
