Clone FMO07204 Report

Search the DGRC for FMO07204

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:72
Well:4
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13323-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07204.5prime Sequence

362 bp (362 high quality bases) assembled on 2008-10-06

> FMO07204.5prime
CAGTCGACATGCGTCTTCTGCTCATCCTCTCAGTTGTCCTGGCCGTGATC
CTTGGCTGCCACGCCTACGGCGCCACCTGGGGGCGTCGCAATAACAACGA
CTACCTGCTGTCCCGCACCACGGAAGTCCGCAATCCGATCAAGAACAACT
ACTGGAACGTGAACGTGAACTATCCCGCCGGATTCTACAACATCTCCGCC
GTGATCGTCTACGACAACTTTAAGAACAACTCCGGCGCATCTCCTAGCCT
CTATTCCGGCGGTCCGGGCTATCGCTTCGCCACCGTGAATCTTCGTGGTC
AGGTGAACCGCGGAATCAACTCCACCGTCGAGATCTGGGGTCGTGCAAGC
TTTCTAGACCAT

FMO07204.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG13323-RB 2562 CG13323-RB 39..376 7..344 1690 100 Plus
CG13323-RA 521 CG13323-RA 39..376 7..344 1690 100 Plus
CG13324-RA 511 CG13324-RA 37..374 7..344 1300 92.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13046881..13047218 344..7 1690 100 Minus
2R 25286936 2R 13049283..13049620 344..7 1300 92.3 Minus
Blast to na_te.dros performed on 2014-11-28 22:28:38 has no hits.

FMO07204.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:14 Download gff for FMO07204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13323-RA 33..380 1..349 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:43:16 Download gff for FMO07204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13323-RA 65..412 1..349 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:39 Download gff for FMO07204.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13323-RA 33..380 1..349 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:39 Download gff for FMO07204.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13046877..13047224 1..349 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:14 Download gff for FMO07204.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8934382..8934729 1..349 98   Minus